BLASTX nr result
ID: Cnidium21_contig00038012
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00038012 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531766.1| transcription factor, putative [Ricinus comm... 86 3e-15 ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ... 81 1e-13 ref|XP_002330570.1| high mobility group family [Populus trichoca... 76 3e-12 ref|XP_003592799.1| High mobility group protein B3 [Medicago tru... 65 4e-09 ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-... 61 8e-08 >ref|XP_002531766.1| transcription factor, putative [Ricinus communis] gi|223528602|gb|EEF30622.1| transcription factor, putative [Ricinus communis] Length = 313 Score = 85.9 bits (211), Expect = 3e-15 Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 5/82 (6%) Frame = -1 Query: 306 NLLENSANVHHLSAG-----SNLEPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTP 142 NL+ SA V ++ S L+ GSSV GTID KFD+GY++TV LGSEQLKGV+YH P Sbjct: 149 NLVNGSATVEGVTVNQFPGSSQLQLGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIP 208 Query: 141 TESQMSQNSNNTAAPRRRSRNR 76 E MSQ+S+N+ P RR R R Sbjct: 209 NEFYMSQSSHNSDLPPRRHRKR 230 >ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera] gi|296090037|emb|CBI39856.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%) Frame = -1 Query: 321 GSSARNLLENSANVHHLSAGSNLEPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTP 142 GS+ + ++SA + L L+PG V GTID KFD+GY+V+VNLGS+ LKGV+YH P Sbjct: 163 GSATTPVFQDSATTNDLPVSPRLQPGCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIP 222 Query: 141 -TESQMSQNSNNTAAPRRRSRNR 76 ES MS++SN +A P R+ R Sbjct: 223 NNESHMSRSSNASAVPPPRNWKR 245 >ref|XP_002330570.1| high mobility group family [Populus trichocarpa] gi|222872128|gb|EEF09259.1| high mobility group family [Populus trichocarpa] Length = 316 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/75 (50%), Positives = 48/75 (64%) Frame = -1 Query: 300 LENSANVHHLSAGSNLEPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTPTESQMSQ 121 LE A + S+ L+ G SV G ID KFD+GY+VTVNLG+ QLKGV+YH P SQ Sbjct: 159 LEEGAITNQFSSSQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQ 218 Query: 120 NSNNTAAPRRRSRNR 76 +S ++ P RR R R Sbjct: 219 DSRSSDLPPRRRRKR 233 >ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula] gi|355481847|gb|AES63050.1| High mobility group protein B3 [Medicago truncatula] Length = 417 Score = 65.5 bits (158), Expect = 4e-09 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 11/89 (12%) Frame = -1 Query: 309 RNLLENSANVHHLSAGSNLEPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTP---- 142 + L NSA LS GS+ GS V+G ID KFDSGY+VTV +GSE+LKGV+Y P Sbjct: 168 QQLKVNSAPPEGLSMGSS-SAGSQVVGVIDGKFDSGYLVTVTIGSEKLKGVLYQAPQNPV 226 Query: 141 ---TESQMSQNSNNTAAP----RRRSRNR 76 + + N+NN A RRR R + Sbjct: 227 LPASHHSVPANNNNVTASVGVHRRRRRKK 255 >ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max] Length = 419 Score = 61.2 bits (147), Expect = 8e-08 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 11/84 (13%) Frame = -1 Query: 294 NSANVHHLSAGSNLEPGSSVIGTIDAKFDSGYIVTVNLGSEQLKGVIYHTP-------TE 136 N+A + A S+ GS VIG ID KF+SGY+VTV +GSE+LKGV+Y P + Sbjct: 173 NAAKLPEAMAASSA--GSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLTASH 230 Query: 135 SQMSQNSNNTAAP----RRRSRNR 76 S N+NN +A RRR R + Sbjct: 231 HSASANNNNASASLGVHRRRRRKK 254