BLASTX nr result

ID: Cnidium21_contig00038000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038000
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vini...    61   1e-07
ref|XP_002874370.1| seryl-tRNA synthetase [Arabidopsis lyrata su...    60   1e-07
ref|NP_198099.1| seryl-tRNA synthetase [Arabidopsis thaliana] gi...    60   2e-07
ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata su...    60   2e-07
ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glyci...    59   3e-07

>ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vinifera]
           gi|296088317|emb|CBI36762.3| unnamed protein product
           [Vitis vinifera]
          Length = 447

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   CILENYQRDDGVEVPEVLRPYMGGKTFMPF 92
           CILENYQ++DGVEVPE LRP+MGGKTF+PF
Sbjct: 403 CILENYQKEDGVEVPEPLRPFMGGKTFLPF 432


>ref|XP_002874370.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
           gi|297320207|gb|EFH50629.1| seryl-tRNA synthetase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   CILENYQRDDGVEVPEVLRPYMGGKTFMPF 92
           CILENYQR+DGV++P+VL+PYMGGK FMPF
Sbjct: 403 CILENYQREDGVDIPDVLQPYMGGKKFMPF 432


>ref|NP_198099.1| seryl-tRNA synthetase [Arabidopsis thaliana]
           gi|2501056|sp|Q39230.1|SYS_ARATH RecName:
           Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
           synthetase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
           gi|13507571|gb|AAK28648.1|AF360352_1 putative seryl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|1359497|emb|CAA94388.1| seryl-tRNA Synthetase
           [Arabidopsis thaliana] gi|15293241|gb|AAK93731.1|
           putative seryl-tRNA synthetase [Arabidopsis thaliana]
           gi|332006309|gb|AED93692.1| seryl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 451

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/30 (76%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   CILENYQRDDGVEVPEVLRPYMGGKTFMPF 92
           CILENYQR+DGV++PEVL+P+MGG+TF+PF
Sbjct: 406 CILENYQREDGVDIPEVLQPFMGGETFLPF 435


>ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
           gi|297320206|gb|EFH50628.1| seryl-tRNA synthetase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/30 (76%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   CILENYQRDDGVEVPEVLRPYMGGKTFMPF 92
           CILENYQR+DGV++PEVL+P+MGG+TF+PF
Sbjct: 406 CILENYQREDGVDIPEVLQPFMGGETFLPF 435


>ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
          Length = 447

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   CILENYQRDDGVEVPEVLRPYMGGKTFMPF 92
           CILEN Q++DGVE+PEVLRP+MGGKTF+PF
Sbjct: 403 CILENNQKEDGVEIPEVLRPFMGGKTFLPF 432


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