BLASTX nr result

ID: Cnidium21_contig00037999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037999
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...   126   5e-51
ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   117   7e-48
ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   117   6e-47
emb|CBI28825.3| unnamed protein product [Vitis vinifera]              117   6e-47
emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]   117   1e-46

>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  126 bits (317), Expect(2) = 5e-51
 Identities = 63/91 (69%), Positives = 73/91 (80%)
 Frame = -3

Query: 446 MVDKQVCTWNALISSLALNSMENQALGMFEKMKSTRVKPNEVTFVAVLIACARANLVELG 267
           M+ K+VCTWNA+ISSLA N  E QAL MF+KMK   + PNEVTF+AVL ACARA LVE+G
Sbjct: 289 MMVKKVCTWNAIISSLANNGREEQALDMFKKMKGEGLCPNEVTFIAVLTACARAKLVEIG 348

Query: 266 LELFESMSRVSSIVPRMEHYGCVVDLLGRAG 174
           LELF+SM+    +VP MEHYGCVVDLLG AG
Sbjct: 349 LELFQSMAGEFGLVPIMEHYGCVVDLLGMAG 379



 Score = 99.8 bits (247), Expect(2) = 5e-51
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = -2

Query: 174 VLTEAQEFIRRMPFEPDASVLGALLGACKVHGAIELGNEVAKRIIELQPLHCGQYV 7
           +L EA EFIRRMPFEPDAS LGALLGACK+HGAI+LGNEV  R++ELQP HCGQYV
Sbjct: 380 LLREASEFIRRMPFEPDASALGALLGACKIHGAIDLGNEVGSRLLELQPQHCGQYV 435


>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  117 bits (292), Expect(2) = 7e-48
 Identities = 60/91 (65%), Positives = 68/91 (74%)
 Frame = -3

Query: 446 MVDKQVCTWNALISSLALNSMENQALGMFEKMKSTRVKPNEVTFVAVLIACARANLVELG 267
           MV K VCTWNA+ISSLA N  E QAL +FEKMK   + P+EVTFVAV+ ACAR+  V LG
Sbjct: 297 MVVKGVCTWNAMISSLACNGREKQALDLFEKMKMQGLCPDEVTFVAVITACARSKFVVLG 356

Query: 266 LELFESMSRVSSIVPRMEHYGCVVDLLGRAG 174
           L  F+SM     +VPRM HYGCVVDLLGRAG
Sbjct: 357 LGFFQSMWCDFGVVPRMVHYGCVVDLLGRAG 387



 Score = 99.0 bits (245), Expect(2) = 7e-48
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = -2

Query: 174 VLTEAQEFIRRMPFEPDASVLGALLGACKVHGAIELGNEVAKRIIELQPLHCGQYV 7
           +L EA EFI+RMPFEPDA+VLGALLGACKVHGAIELGNEV +R++ELQP HCG+YV
Sbjct: 388 LLEEATEFIKRMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLELQPHHCGRYV 443


>ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g10330-like [Vitis
           vinifera]
          Length = 454

 Score =  117 bits (294), Expect(2) = 6e-47
 Identities = 60/91 (65%), Positives = 68/91 (74%)
 Frame = -3

Query: 446 MVDKQVCTWNALISSLALNSMENQALGMFEKMKSTRVKPNEVTFVAVLIACARANLVELG 267
           MV K VCTWNA+ISSLA N  E QAL +FEKMK   + P+EVTFVAV+ ACAR+  V LG
Sbjct: 269 MVVKGVCTWNAMISSLACNGREKQALDLFEKMKMKGLCPDEVTFVAVITACARSKFVVLG 328

Query: 266 LELFESMSRVSSIVPRMEHYGCVVDLLGRAG 174
           L  F+SM     +VPRM HYGCVVDLLGRAG
Sbjct: 329 LGFFQSMRCDFGVVPRMMHYGCVVDLLGRAG 359



 Score = 95.1 bits (235), Expect(2) = 6e-47
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -2

Query: 174 VLTEAQEFIRRMPFEPDASVLGALLGACKVHGAIELGNEVAKRIIELQPLHCGQYV 7
           +L EA EFI+ MPFEPDA+VLGALLGACKVHGAIELGNEV +R++E QP HCG+YV
Sbjct: 360 LLEEATEFIKSMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLEFQPHHCGRYV 415


>emb|CBI28825.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  117 bits (294), Expect(2) = 6e-47
 Identities = 60/91 (65%), Positives = 68/91 (74%)
 Frame = -3

Query: 446 MVDKQVCTWNALISSLALNSMENQALGMFEKMKSTRVKPNEVTFVAVLIACARANLVELG 267
           MV K VCTWNA+ISSLA N  E QAL +FEKMK   + P+EVTFVAV+ ACAR+  V LG
Sbjct: 80  MVVKGVCTWNAMISSLACNGREKQALDLFEKMKMKGLCPDEVTFVAVITACARSKFVVLG 139

Query: 266 LELFESMSRVSSIVPRMEHYGCVVDLLGRAG 174
           L  F+SM     +VPRM HYGCVVDLLGRAG
Sbjct: 140 LGFFQSMRCDFGVVPRMMHYGCVVDLLGRAG 170



 Score = 95.1 bits (235), Expect(2) = 6e-47
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -2

Query: 174 VLTEAQEFIRRMPFEPDASVLGALLGACKVHGAIELGNEVAKRIIELQPLHCGQYV 7
           +L EA EFI+ MPFEPDA+VLGALLGACKVHGAIELGNEV +R++E QP HCG+YV
Sbjct: 171 LLEEATEFIKSMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLEFQPHHCGRYV 226


>emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]
          Length = 480

 Score =  117 bits (293), Expect(2) = 1e-46
 Identities = 60/91 (65%), Positives = 68/91 (74%)
 Frame = -3

Query: 446 MVDKQVCTWNALISSLALNSMENQALGMFEKMKSTRVKPNEVTFVAVLIACARANLVELG 267
           MV K VCTWNA+ISSLA N  E QAL +FEKMK   + P+EVTFVAV+ ACAR+  V LG
Sbjct: 205 MVVKGVCTWNAMISSLACNGREKQALDLFEKMKMXGLCPDEVTFVAVITACARSKFVVLG 264

Query: 266 LELFESMSRVSSIVPRMEHYGCVVDLLGRAG 174
           L  F+SM     +VPRM HYGCVVDLLGRAG
Sbjct: 265 LGFFQSMWCDFGVVPRMXHYGCVVDLLGRAG 295



 Score = 94.7 bits (234), Expect(2) = 1e-46
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -2

Query: 174 VLTEAQEFIRRMPFEPDASVLGALLGACKVHGAIELGNEVAKRIIELQPLHCGQYV 7
           +L EA EFI+ MPFEPDA+VLGALLGACKVHGAIELGNEV +R++E QP HCG+YV
Sbjct: 296 LLEEATEFIKXMPFEPDATVLGALLGACKVHGAIELGNEVGRRLLEXQPHHCGRYV 351


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