BLASTX nr result

ID: Cnidium21_contig00037990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037990
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556084.1| PREDICTED: protein HOTHEAD-like [Glycine max]     169   3e-40
ref|XP_002865884.1| glucose-methanol-choline oxidoreductase fami...   166   2e-39
ref|NP_001119417.1| Glucose-methanol-choline (GMC) oxidoreductas...   165   3e-39
ref|NP_200008.1| Glucose-methanol-choline (GMC) oxidoreductase f...   165   3e-39
ref|XP_003557066.1| PREDICTED: protein HOTHEAD-like [Glycine max]     164   7e-39

>ref|XP_003556084.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 575

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/117 (67%), Positives = 98/117 (83%)
 Frame = +1

Query: 4   SAAVSKLRYATGTIQLYIDIILALPLNLRPRHLSATYSLEQFCMDTVMTIWHYHGGCHVN 183
           S A SK RY    +Q  ID++L LP+NLRP+H +A +SLEQ+C+DTV+TIWHYHGGC   
Sbjct: 460 SKAFSKFRYHNMPVQSLIDLMLHLPVNLRPKHANAAFSLEQYCIDTVLTIWHYHGGCQSG 519

Query: 184 KVVDHNYKVLGVDALRVIDGSTFYFDSPGTNPQATVMMLGRYMGQRILQERSSNGRK 354
           KVVDHNYKV+GV+ALRVIDGSTF+  SPGTNPQATVMMLGRYMG++I+++R  +GRK
Sbjct: 520 KVVDHNYKVIGVEALRVIDGSTFH-RSPGTNPQATVMMLGRYMGEKIIKKRFFHGRK 575


>ref|XP_002865884.1| glucose-methanol-choline oxidoreductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297311719|gb|EFH42143.1|
           glucose-methanol-choline oxidoreductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 585

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/113 (67%), Positives = 96/113 (84%)
 Frame = +1

Query: 4   SAAVSKLRYATGTIQLYIDIILALPLNLRPRHLSATYSLEQFCMDTVMTIWHYHGGCHVN 183
           S A SK +Y   TI   +D++L++P NLRPRH+++ ++L+QFC+DTVMTIWHYHGGC V 
Sbjct: 466 SKAFSKFKYPDATIHGLLDLMLSVPTNLRPRHITSMFNLKQFCIDTVMTIWHYHGGCQVG 525

Query: 184 KVVDHNYKVLGVDALRVIDGSTFYFDSPGTNPQATVMMLGRYMGQRILQERSS 342
           +VVD NY++LG+D+LRVIDGSTF   SPGTNPQATVMMLGRYMGQRILQER++
Sbjct: 526 RVVDKNYRILGIDSLRVIDGSTF-LKSPGTNPQATVMMLGRYMGQRILQERAN 577


>ref|NP_001119417.1| Glucose-methanol-choline (GMC) oxidoreductase family protein
           [Arabidopsis thaliana] gi|332008767|gb|AED96150.1|
           Glucose-methanol-choline (GMC) oxidoreductase family
           protein [Arabidopsis thaliana]
          Length = 553

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/111 (69%), Positives = 93/111 (83%)
 Frame = +1

Query: 4   SAAVSKLRYATGTIQLYIDIILALPLNLRPRHLSATYSLEQFCMDTVMTIWHYHGGCHVN 183
           S A SK +Y   TI   +D++L++P NLRPRH+++ ++L QFC+DTVMTIWHYHGGC V 
Sbjct: 434 SKAFSKFKYPDATIHGLLDLMLSVPTNLRPRHITSMFNLRQFCIDTVMTIWHYHGGCQVG 493

Query: 184 KVVDHNYKVLGVDALRVIDGSTFYFDSPGTNPQATVMMLGRYMGQRILQER 336
           +VVD NY+VLG+D+LRVIDGSTF   SPGTNPQATVMMLGRYMGQRILQER
Sbjct: 494 RVVDKNYRVLGIDSLRVIDGSTF-LKSPGTNPQATVMMLGRYMGQRILQER 543


>ref|NP_200008.1| Glucose-methanol-choline (GMC) oxidoreductase family protein
           [Arabidopsis thaliana]
           gi|14194161|gb|AAK56275.1|AF367287_1 AT5g51950/MSG15_3
           [Arabidopsis thaliana] gi|30102488|gb|AAP21162.1|
           At5g51950/MSG15_3 [Arabidopsis thaliana]
           gi|332008766|gb|AED96149.1| Glucose-methanol-choline
           (GMC) oxidoreductase family protein [Arabidopsis
           thaliana]
          Length = 586

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/111 (69%), Positives = 93/111 (83%)
 Frame = +1

Query: 4   SAAVSKLRYATGTIQLYIDIILALPLNLRPRHLSATYSLEQFCMDTVMTIWHYHGGCHVN 183
           S A SK +Y   TI   +D++L++P NLRPRH+++ ++L QFC+DTVMTIWHYHGGC V 
Sbjct: 467 SKAFSKFKYPDATIHGLLDLMLSVPTNLRPRHITSMFNLRQFCIDTVMTIWHYHGGCQVG 526

Query: 184 KVVDHNYKVLGVDALRVIDGSTFYFDSPGTNPQATVMMLGRYMGQRILQER 336
           +VVD NY+VLG+D+LRVIDGSTF   SPGTNPQATVMMLGRYMGQRILQER
Sbjct: 527 RVVDKNYRVLGIDSLRVIDGSTF-LKSPGTNPQATVMMLGRYMGQRILQER 576


>ref|XP_003557066.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 594

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = +1

Query: 4   SAAVSKLRYATGTIQLYIDIILALPLNLRPRHLSATYSLEQFCMDTVMTIWHYHGGCHVN 183
           S A SK RY    +Q  ID++L LP+NLRP+H +A +SLEQ+C+DTV+TI+HYHGGC   
Sbjct: 475 SKAFSKFRYHNMPVQALIDLMLHLPVNLRPKHANAAFSLEQYCIDTVLTIYHYHGGCQSG 534

Query: 184 KVVDHNYKVLGVDALRVIDGSTFYFDSPGTNPQATVMMLGRYMGQRILQERSSNG 348
           KVVDHNYKV+GV+ALRVIDGSTF+  SPGTNPQATVMMLGRYMG++I++E SS G
Sbjct: 535 KVVDHNYKVIGVEALRVIDGSTFH-GSPGTNPQATVMMLGRYMGEKIIKEDSSIG 588


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