BLASTX nr result

ID: Cnidium21_contig00037969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037969
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632756.1| PREDICTED: DNA replication complex GINS prot...   157   1e-36
tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea m...   140   2e-31
ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|1956306...   140   2e-31
ref|XP_003576019.1| PREDICTED: DNA replication complex GINS prot...   139   5e-31
ref|XP_004135842.1| PREDICTED: probable DNA replication complex ...   137   2e-30

>ref|XP_003632756.1| PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis
           vinifera] gi|297743415|emb|CBI36282.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  157 bits (398), Expect = 1e-36
 Identities = 76/108 (70%), Positives = 93/108 (86%)
 Frame = +1

Query: 1   RAEVIQHLGWTIERVLPEEIEEKLSNPEKDYFKNHSATLQSYMSELDLDLAVDMVPPKDP 180
           RAE+I++L W I  VLP+EI EKLS  E++YFKNHS  L+SYMSEL+LDL VDMVPPKDP
Sbjct: 89  RAEIIRNLRWKIGPVLPQEIHEKLSYSEEEYFKNHSTALESYMSELELDLTVDMVPPKDP 148

Query: 181 YIKVRVLEEIGNVVLSDQIANLACHAILFLRRTDAEHYISQGLMEELS 324
           YI+VRVL++IG V+LSDQ ANLACH++ FL+R DAE +ISQGLMEEL+
Sbjct: 149 YIQVRVLDDIGEVLLSDQSANLACHSMHFLKRIDAEQFISQGLMEELT 196


>tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea mays]
          Length = 204

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/106 (65%), Positives = 84/106 (79%)
 Frame = +1

Query: 1   RAEVIQHLGWTIERVLPEEIEEKLSNPEKDYFKNHSATLQSYMSELDLDLAVDMVPPKDP 180
           RAEVIQ   W I  VLP +I+EKL   EK+YFKNHSA ++SY+SE+D+DL VDMVPPKDP
Sbjct: 96  RAEVIQSFRWKIGPVLPHDIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDP 155

Query: 181 YIKVRVLEEIGNVVLSDQIANLACHAILFLRRTDAEHYISQGLMEE 318
           YI+VRVLE+IG V L D   +L  +++ FLRRTDAE +ISQGLMEE
Sbjct: 156 YIQVRVLEDIGEVSLGDHSVSLTKNSLHFLRRTDAEQFISQGLMEE 201


>ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|195630675|gb|ACG36644.1| DNA
           replication complex GINS protein PSF1 [Zea mays]
           gi|223942169|gb|ACN25168.1| unknown [Zea mays]
           gi|414584737|tpg|DAA35308.1| TPA: DNA replication
           complex GINS protein PSF1 [Zea mays]
          Length = 197

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/106 (65%), Positives = 84/106 (79%)
 Frame = +1

Query: 1   RAEVIQHLGWTIERVLPEEIEEKLSNPEKDYFKNHSATLQSYMSELDLDLAVDMVPPKDP 180
           RAEVIQ   W I  VLP +I+EKL   EK+YFKNHSA ++SY+SE+D+DL VDMVPPKDP
Sbjct: 89  RAEVIQSFRWKIGPVLPHDIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDP 148

Query: 181 YIKVRVLEEIGNVVLSDQIANLACHAILFLRRTDAEHYISQGLMEE 318
           YI+VRVLE+IG V L D   +L  +++ FLRRTDAE +ISQGLMEE
Sbjct: 149 YIQVRVLEDIGEVSLGDHSVSLTKNSLHFLRRTDAEQFISQGLMEE 194


>ref|XP_003576019.1| PREDICTED: DNA replication complex GINS protein PSF1-like
           [Brachypodium distachyon]
          Length = 197

 Score =  139 bits (349), Expect = 5e-31
 Identities = 68/106 (64%), Positives = 83/106 (78%)
 Frame = +1

Query: 1   RAEVIQHLGWTIERVLPEEIEEKLSNPEKDYFKNHSATLQSYMSELDLDLAVDMVPPKDP 180
           RAE IQ   W +  VLP EI+EKL   EK+YFKNHSA ++SY+SE+D+DL VDMVPPKDP
Sbjct: 89  RAETIQSFRWKLGPVLPHEIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDP 148

Query: 181 YIKVRVLEEIGNVVLSDQIANLACHAILFLRRTDAEHYISQGLMEE 318
           YI+VRVLE+IG V L D   +L  +++ FLRRTDAE +ISQGLMEE
Sbjct: 149 YIQVRVLEDIGEVSLGDHSISLTKNSLHFLRRTDAEQFISQGLMEE 194


>ref|XP_004135842.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Cucumis sativus] gi|449491012|ref|XP_004158773.1|
           PREDICTED: probable DNA replication complex GINS protein
           PSF1-like [Cucumis sativus]
          Length = 200

 Score =  137 bits (344), Expect = 2e-30
 Identities = 71/111 (63%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   RAEVIQHLGW-TIERVLPEEIEEKLSNPEKDYFKNHSATLQSYMSELDLDLAVDMVPPKD 177
           RAE+I+ L W  +  ++P EI+EKLSN E++YFK HSA L+ YMS+L+LDL VDMVPPKD
Sbjct: 89  RAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKD 148

Query: 178 PYIKVRVLEEIG-NVVLS-DQIANLACHAILFLRRTDAEHYISQGLMEELS 324
           PYI+VRVL++IG  +VLS D+ AN A H+I FL+RTDAE YIS+GLMEEL+
Sbjct: 149 PYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELT 199


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