BLASTX nr result

ID: Cnidium21_contig00037965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037965
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ...   160   8e-38
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   158   4e-37
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   158   4e-37
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]    158   4e-37
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   157   8e-37

>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
           gi|241947143|gb|EES20288.1| hypothetical protein
           SORBIDRAFT_0013s009070 [Sorghum bicolor]
          Length = 1219

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/122 (65%), Positives = 91/122 (74%)
 Frame = +3

Query: 3   NAFLHGHLNETVYMHQPMGF*DPVHPDYVCLLLKSLYGLIQAPRAWFKRFADFVSSIGFS 182
           NAFLHGHLNETVY  QP GF D   PD+VCLL KSLYGL QAPRAW++RF  FV   GF+
Sbjct: 377 NAFLHGHLNETVYCQQPPGFIDSAAPDHVCLLQKSLYGLKQAPRAWYQRFGSFVQQSGFT 436

Query: 183 QSKSDHSLFIYRNGHDMSYILLYVDDIILTTSSDSLRTSIMSQLASEFAMTDLGPLNYFW 362
            S SD SLF+Y+ G D +Y+LLYVDDIILT SS +L   I   L SEFAMTDLG L++F 
Sbjct: 437 ASTSDSSLFVYKEGADTAYLLLYVDDIILTASSPALLRRITELLHSEFAMTDLGDLHHFL 496

Query: 363 GI 368
           GI
Sbjct: 497 GI 498


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/122 (63%), Positives = 95/122 (77%)
 Frame = +3

Query: 3    NAFLHGHLNETVYMHQPMGF*DPVHPDYVCLLLKSLYGLIQAPRAWFKRFADFVSSIGFS 182
            NAFLHG+L ETVY  QP GF DP  P  VCLL KSLYGL QAPRAW++RFA ++  +GF+
Sbjct: 747  NAFLHGNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFT 806

Query: 183  QSKSDHSLFIYRNGHDMSYILLYVDDIILTTSSDSLRTSIMSQLASEFAMTDLGPLNYFW 362
             S SD SLFIY++G +++Y+LLYVDDI+LT SS SL   I ++L SEFAMTDLG L++F 
Sbjct: 807  SSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFL 866

Query: 363  GI 368
            GI
Sbjct: 867  GI 868


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/122 (63%), Positives = 95/122 (77%)
 Frame = +3

Query: 3    NAFLHGHLNETVYMHQPMGF*DPVHPDYVCLLLKSLYGLIQAPRAWFKRFADFVSSIGFS 182
            NAFLHG+L ETVY  QP GF DP  P  VCLL KSLYGL QAPRAW++RFA ++  +GF+
Sbjct: 947  NAFLHGNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFT 1006

Query: 183  QSKSDHSLFIYRNGHDMSYILLYVDDIILTTSSDSLRTSIMSQLASEFAMTDLGPLNYFW 362
             S SD SLFIY++G +++Y+LLYVDDI+LT SS SL   I ++L SEFAMTDLG L++F 
Sbjct: 1007 SSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFL 1066

Query: 363  GI 368
            GI
Sbjct: 1067 GI 1068


>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1146

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/122 (63%), Positives = 95/122 (77%)
 Frame = +3

Query: 3    NAFLHGHLNETVYMHQPMGF*DPVHPDYVCLLLKSLYGLIQAPRAWFKRFADFVSSIGFS 182
            NAFLHG+L ETVY  QP GF DP  P  VCLL KSLYGL QAPRAW++RFA ++  +GF+
Sbjct: 843  NAFLHGNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFT 902

Query: 183  QSKSDHSLFIYRNGHDMSYILLYVDDIILTTSSDSLRTSIMSQLASEFAMTDLGPLNYFW 362
             S SD SLFIY++G +++Y+LLYVDDI+LT SS SL   I ++L SEFAMTDLG L++F 
Sbjct: 903  SSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFL 962

Query: 363  GI 368
            GI
Sbjct: 963  GI 964


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/122 (63%), Positives = 95/122 (77%)
 Frame = +3

Query: 3    NAFLHGHLNETVYMHQPMGF*DPVHPDYVCLLLKSLYGLIQAPRAWFKRFADFVSSIGFS 182
            NAFLHG+L ETVY  QP GF DP  P  VCLL KSLYGL QAPRAW++RFA ++  +GF+
Sbjct: 709  NAFLHGNLEETVYCQQPSGFVDPSAPTAVCLLQKSLYGLKQAPRAWYQRFATYICQLGFT 768

Query: 183  QSKSDHSLFIYRNGHDMSYILLYVDDIILTTSSDSLRTSIMSQLASEFAMTDLGPLNYFW 362
             S SD SLFIY++G +++Y+LLYVDDI+LT SS SL   I ++L SEFAMTDLG L++F 
Sbjct: 769  SSASDTSLFIYKDGDNIAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFL 828

Query: 363  GI 368
            GI
Sbjct: 829  GI 830


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