BLASTX nr result
ID: Cnidium21_contig00037941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00037941
(740 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37462.3| unnamed protein product [Vitis vinifera] 390 e-106
ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi... 390 e-106
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera] 388 e-106
ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2... 376 e-102
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi... 365 7e-99
>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 390 bits (1003), Expect = e-106
Identities = 183/244 (75%), Positives = 215/244 (88%)
Frame = +1
Query: 4 LLEFMRTRGTTLSSTTARTYAIMIVAFVQSNKTDEAFKLLGDMIGSGTLPDVSTYKELIE 183
L EFMRT+G+T+SS TA+TYAIMI+A VQS++T+E FKL+ DMI SG LPDVSTYK++IE
Sbjct: 430 LFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIE 489
Query: 184 GMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRLYKKMNEVGCMP 363
GMCLAGK+E AYKFL+EMGNKGY PDIVTYNCFL VLC++K EEAL LY +M E GC+P
Sbjct: 490 GMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVP 549
Query: 364 SVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEGLFGCNNTADASFLL 543
SV TFNMLI+M+FEIG+PDGAFE WHEM+K+G DTD+YCVMIEGLF CN DA FLL
Sbjct: 550 SVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLL 609
Query: 544 EEVVNRGLKLPYRKFDSFLMQLSSVGDLQAIHRLSDHMRKFYNPAMARRFSLNQKRKSMS 723
+EVVN+G+KLPYRKFD FLMQLS +GDLQAIH+LS+HMRKFYNPAMARRF+LNQKR+SMS
Sbjct: 610 DEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAMARRFALNQKRRSMS 669
Query: 724 FKGK 735
+GK
Sbjct: 670 LRGK 673
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Frame = +1
Query: 145 TLPDVSTYKELIEGMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEAL 324
T P+++ L++ +C + L+EM G+ PD TYN + C + EA
Sbjct: 371 TQPEINALNLLLDALCK--NPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEAT 428
Query: 325 RLYKKMNEVG---CMPSVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMI 495
L++ M G P+ +T+ ++I + + F+ +M G + D +Y +I
Sbjct: 429 ELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVI 488
Query: 496 EGLFGCNNTADASFLLEEVVNRGLKLPYRKFDSFL 600
EG+ +A LEE+ N+G + ++ FL
Sbjct: 489 EGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFL 523
>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 390 bits (1003), Expect = e-106
Identities = 183/244 (75%), Positives = 215/244 (88%)
Frame = +1
Query: 4 LLEFMRTRGTTLSSTTARTYAIMIVAFVQSNKTDEAFKLLGDMIGSGTLPDVSTYKELIE 183
L EFMRT+G+T+SS TA+TYAIMI+A VQS++T+E FKL+ DMI SG LPDVSTYK++IE
Sbjct: 466 LFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIE 525
Query: 184 GMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRLYKKMNEVGCMP 363
GMCLAGK+E AYKFL+EMGNKGY PDIVTYNCFL VLC++K EEAL LY +M E GC+P
Sbjct: 526 GMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVP 585
Query: 364 SVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEGLFGCNNTADASFLL 543
SV TFNMLI+M+FEIG+PDGAFE WHEM+K+G DTD+YCVMIEGLF CN DA FLL
Sbjct: 586 SVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLL 645
Query: 544 EEVVNRGLKLPYRKFDSFLMQLSSVGDLQAIHRLSDHMRKFYNPAMARRFSLNQKRKSMS 723
+EVVN+G+KLPYRKFD FLMQLS +GDLQAIH+LS+HMRKFYNPAMARRF+LNQKR+SMS
Sbjct: 646 DEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAMARRFALNQKRRSMS 705
Query: 724 FKGK 735
+GK
Sbjct: 706 LRGK 709
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 151 PDVSTYKELIEGMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRL 330
PD +TY L G C + L+EM G+ PD TYN + C + EA L
Sbjct: 407 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATEL 466
Query: 331 YKKMNEVG---CMPSVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEG 501
++ M G P+ +T+ ++I + + F+ +M G + D +Y +IEG
Sbjct: 467 FEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEG 526
Query: 502 LFGCNNTADASFLLEEVVNRGLKLPYRKFDSFL 600
+ +A LEE+ N+G + ++ FL
Sbjct: 527 MCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFL 559
>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 388 bits (997), Expect = e-106
Identities = 181/243 (74%), Positives = 214/243 (88%)
Frame = +1
Query: 4 LLEFMRTRGTTLSSTTARTYAIMIVAFVQSNKTDEAFKLLGDMIGSGTLPDVSTYKELIE 183
L EFMRT+G+T+SS TA+TYAIMI+A VQS++T+E FKL+ DMI SG LPDVSTYK++IE
Sbjct: 439 LFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIE 498
Query: 184 GMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRLYKKMNEVGCMP 363
GMCLAGK+E AYKFL+EMGNKGY PDIVTYNCFL VLC++K EEAL LY +M E GC+P
Sbjct: 499 GMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVP 558
Query: 364 SVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEGLFGCNNTADASFLL 543
SV TFNMLI+M+FEIG+PDGAFE WHEM+K+G DTD+YCVMIEGLF CN DA FLL
Sbjct: 559 SVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLL 618
Query: 544 EEVVNRGLKLPYRKFDSFLMQLSSVGDLQAIHRLSDHMRKFYNPAMARRFSLNQKRKSMS 723
+EV+N+G+KLPYRKFD FLMQLS +GDLQAIH+LS+HMRKFYNPAMARRF+LNQKR+SMS
Sbjct: 619 DEVINKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAMARRFALNQKRRSMS 678
Query: 724 FKG 732
+G
Sbjct: 679 LRG 681
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 151 PDVSTYKELIEGMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRL 330
PD +TY L G C + L+EM G+ PD TYN + C + EA L
Sbjct: 380 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATEL 439
Query: 331 YKKMNEVG---CMPSVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEG 501
++ M G P+ +T+ ++I + + F+ +M G + D +Y +IEG
Sbjct: 440 FEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEG 499
Query: 502 LFGCNNTADASFLLEEVVNRGLKLPYRKFDSFL 600
+ +A LEE+ N+G + ++ FL
Sbjct: 500 MCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFL 532
>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
predicted protein [Populus trichocarpa]
Length = 472
Score = 376 bits (965), Expect = e-102
Identities = 175/244 (71%), Positives = 213/244 (87%)
Frame = +1
Query: 4 LLEFMRTRGTTLSSTTARTYAIMIVAFVQSNKTDEAFKLLGDMIGSGTLPDVSTYKELIE 183
L EFMRT+G+T+SS TA+TYAIMI A V++N+ DE FKLL DMI SG LPDVST+KELIE
Sbjct: 229 LFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIE 288
Query: 184 GMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRLYKKMNEVGCMP 363
GMC AGKI+ AY+FL EMGNKGYPPDIVTYNCFLKVLC++KN EEALRLY++M E GC P
Sbjct: 289 GMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFP 348
Query: 364 SVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEGLFGCNNTADASFLL 543
SVQT NMLI+M+FE+GDPDGAFE W+EM+K+G D D+Y VMI+GLFGCN DA FL+
Sbjct: 349 SVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLI 408
Query: 544 EEVVNRGLKLPYRKFDSFLMQLSSVGDLQAIHRLSDHMRKFYNPAMARRFSLNQKRKSMS 723
E++VN+G+KLPY+KFDSFLMQLS +G+++AIHRLS+HMR F+NP+MARR+ LNQKRKSMS
Sbjct: 409 EDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHRLSEHMRTFHNPSMARRYVLNQKRKSMS 468
Query: 724 FKGK 735
+G+
Sbjct: 469 VRGR 472
Score = 61.6 bits (148), Expect = 2e-07
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Frame = +1
Query: 151 PDVSTYKELIEGMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRL 330
PD +TY + G C K L+EM G+ PD TY + C + EA L
Sbjct: 170 PDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAEL 229
Query: 331 YKKMNEVG---CMPSVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEG 501
++ M G P+ +T+ ++I D F+ +M G + D ++ +IEG
Sbjct: 230 FEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEG 289
Query: 502 LFGCNNTADASFLLEEVVNRGLKLPYRKFDSFLMQLSSVGDLQAIHRLSDHM 657
+ +A L+E+ N+G ++ FL L + + RL + M
Sbjct: 290 MCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERM 341
>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 365 bits (936), Expect = 7e-99
Identities = 169/244 (69%), Positives = 208/244 (85%)
Frame = +1
Query: 4 LLEFMRTRGTTLSSTTARTYAIMIVAFVQSNKTDEAFKLLGDMIGSGTLPDVSTYKELIE 183
L EFMRT+G+T+SS TA+TYAI+IVA Q ++ ++ FKL+G MI SG LPDV+TYKE+IE
Sbjct: 223 LFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIE 282
Query: 184 GMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRLYKKMNEVGCMP 363
GMC+ GKI+ AYKFL+EMGNK Y PDIVTYNCFLKVLCD+K E+AL+LY +M E+ C+P
Sbjct: 283 GMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIP 342
Query: 364 SVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEGLFGCNNTADASFLL 543
SVQT+NMLI+M+FE+ DPDGAFE W E++ +G DTD+YCVMIEGLF CN DA FLL
Sbjct: 343 SVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLL 402
Query: 544 EEVVNRGLKLPYRKFDSFLMQLSSVGDLQAIHRLSDHMRKFYNPAMARRFSLNQKRKSMS 723
EEV+N G+KLPY+KFDSFLMQLS +GDLQAIHRLS+HM+KFYN MARRF+L+QKRKS+S
Sbjct: 403 EEVINEGVKLPYKKFDSFLMQLSVIGDLQAIHRLSEHMKKFYNHGMARRFALSQKRKSLS 462
Query: 724 FKGK 735
+GK
Sbjct: 463 LRGK 466
Score = 62.8 bits (151), Expect = 7e-08
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Frame = +1
Query: 151 PDVSTYKELIEGMCLAGKIEAAYKFLDEMGNKGYPPDIVTYNCFLKVLCDSKNREEALRL 330
P+ TY L+ G C K L+EM G+ PD TYN + C + EA+ L
Sbjct: 164 PNAETYNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDL 223
Query: 331 YKKMNEVG---CMPSVQTFNMLITMYFEIGDPDGAFECWHEMEKKGYIADTDSYCVMIEG 501
++ M G P+ +T+ ++I + + F+ M G + D +Y +IEG
Sbjct: 224 FEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEG 283
Query: 502 LFGCNNTADASFLLEEVVNRGLKLPYRKFDSFLMQL 609
+ C +A LEE+ N+ + ++ FL L
Sbjct: 284 MCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVL 319