BLASTX nr result

ID: Cnidium21_contig00037883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037883
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV60643.1| putative armadillo/beta-catenin repeat family pro...   182   2e-44
gb|AFK46109.1| unknown [Medicago truncatula]                          160   1e-37
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   160   1e-37
ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   158   4e-37
ref|XP_002301150.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>gb|ACV60643.1| putative armadillo/beta-catenin repeat family protein [Daucus
           carota]
          Length = 189

 Score =  182 bits (462), Expect = 2e-44
 Identities = 101/143 (70%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
 Frame = -3

Query: 428 KNMEADIQTNFTYLGRTFNSLSINDSSTAFSDCNSDRSGEFSSTSVTSRQLLTSCATVNS 249
           +NME+DIQT FTYLGRTFNSL+I DSS AFSDCNSDRSGEFS+TS  SR+LLT+    NS
Sbjct: 2   ENMESDIQTKFTYLGRTFNSLNIGDSSAAFSDCNSDRSGEFSTTSTQSRRLLTATLAGNS 61

Query: 248 DD-MIEQXXXXXXXXXXXDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXX 72
           DD +IEQ           DQK+AAMELRLLAKNKPENRIKIAQAGAI+P           
Sbjct: 62  DDYVIEQLVSDLQSSSIDDQKMAAMELRLLAKNKPENRIKIAQAGAIKPLISLISSIDPQ 121

Query: 71  XQEYGVTAILNLSLCDENKELIA 3
            QEYGVTAILNLSLCDENKELIA
Sbjct: 122 LQEYGVTAILNLSLCDENKELIA 144


>gb|AFK46109.1| unknown [Medicago truncatula]
          Length = 344

 Score =  160 bits (404), Expect = 1e-37
 Identities = 86/135 (63%), Positives = 100/135 (74%), Gaps = 2/135 (1%)
 Frame = -3

Query: 401 NFTYLGRTFNSLSINDSST--AFSDCNSDRSGEFSSTSVTSRQLLTSCATVNSDDMIEQX 228
           ++TY+GR+FN  SIND ST  AFSDCNSDRSGEF++TS TSR+L  +CA+ NSDD+I Q 
Sbjct: 5   SYTYMGRSFNEFSINDDSTSSAFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQL 64

Query: 227 XXXXXXXXXXDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXXXQEYGVTA 48
                     +QK AAME+RLLAKNKPENRIKIA+A AI+P            QEYGVTA
Sbjct: 65  VSDLHSDSIEEQKQAAMEIRLLAKNKPENRIKIAKADAIKPLISLVTSQDLQLQEYGVTA 124

Query: 47  ILNLSLCDENKELIA 3
           ILNLSLCDENKELIA
Sbjct: 125 ILNLSLCDENKELIA 139


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 352

 Score =  160 bits (404), Expect = 1e-37
 Identities = 82/140 (58%), Positives = 100/140 (71%)
 Frame = -3

Query: 422 MEADIQTNFTYLGRTFNSLSINDSSTAFSDCNSDRSGEFSSTSVTSRQLLTSCATVNSDD 243
           ME + + +FTY+GR+F + S+ND S+AFSDCNSDRSGEF + S  SR+LL +CA  NSDD
Sbjct: 1   MEMETRASFTYMGRSFGNTSVNDDSSAFSDCNSDRSGEFPTASSESRRLLIACAAENSDD 60

Query: 242 MIEQXXXXXXXXXXXDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXXXQE 63
            I Q           +QK AAME+RLLAKNKPENR+KI +AGA++P            QE
Sbjct: 61  FIRQLVLDLESCSIDEQKQAAMEIRLLAKNKPENRLKIVKAGALKPLISLISCSDSQLQE 120

Query: 62  YGVTAILNLSLCDENKELIA 3
           YGVTAILNLSLCDENKE+IA
Sbjct: 121 YGVTAILNLSLCDENKEVIA 140


>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
           gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
           domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  158 bits (400), Expect = 4e-37
 Identities = 84/133 (63%), Positives = 97/133 (72%)
 Frame = -3

Query: 401 NFTYLGRTFNSLSINDSSTAFSDCNSDRSGEFSSTSVTSRQLLTSCATVNSDDMIEQXXX 222
           NFTY+GRTF+ LS  DSS AFSDCNSDRSGEF + S  SR+LL +CA+ NSD++I     
Sbjct: 8   NFTYMGRTFDDLSNGDSSGAFSDCNSDRSGEFPTASSQSRRLLIACASDNSDELIRHLVL 67

Query: 221 XXXXXXXXDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXXXQEYGVTAIL 42
                   +QK AAME+RLLAKNKPENR+KIA+AGA+RP            QEYGVTAIL
Sbjct: 68  DLESCSIEEQKQAAMEIRLLAKNKPENRLKIAKAGAVRPLISLISCTDPQLQEYGVTAIL 127

Query: 41  NLSLCDENKELIA 3
           NLSLCDENKELIA
Sbjct: 128 NLSLCDENKELIA 140


>ref|XP_002301150.1| predicted protein [Populus trichocarpa] gi|222842876|gb|EEE80423.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  157 bits (396), Expect = 1e-36
 Identities = 83/141 (58%), Positives = 99/141 (70%)
 Frame = -3

Query: 425 NMEADIQTNFTYLGRTFNSLSINDSSTAFSDCNSDRSGEFSSTSVTSRQLLTSCATVNSD 246
           +ME     NF Y+GR+ + LS+ND S AFSDCNSD+SGEF +++  SR+LL SCA  NSD
Sbjct: 2   DMEKKNSANFKYMGRSISDLSVNDDSLAFSDCNSDKSGEFPASASQSRRLLLSCAADNSD 61

Query: 245 DMIEQXXXXXXXXXXXDQKLAAMELRLLAKNKPENRIKIAQAGAIRPXXXXXXXXXXXXQ 66
           D+I Q           +QK AAME+RLLAKNKPENR+KIA+AGAI+P            Q
Sbjct: 62  DLIRQLVSDLESCSIDEQKQAAMEIRLLAKNKPENRLKIAKAGAIKPLISLISSSDSQLQ 121

Query: 65  EYGVTAILNLSLCDENKELIA 3
           EYGVTAILNLSLCDENK LIA
Sbjct: 122 EYGVTAILNLSLCDENKGLIA 142


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