BLASTX nr result

ID: Cnidium21_contig00037855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037855
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   150   8e-35
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33

>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/90 (76%), Positives = 79/90 (87%)
 Frame = -2

Query: 270 DIILWSVVIAGYGMHGHGETALTLFNQMVQSGVAPNEVTFTSALHACSHAGLVDEGLSLF 91
           DII WS +IAGYGMHGHGETA++LF+QMVQSGV PNE+TFTS LHACSHAGLVDEGL LF
Sbjct: 493 DIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLF 552

Query: 90  KFMLKIQKSIPKADHYTCMVDLLGRAGRLE 1
           KFML+  +   + DHYTC++DLLGRAGRLE
Sbjct: 553 KFMLEDNQMSLRTDHYTCVIDLLGRAGRLE 582


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/90 (76%), Positives = 79/90 (87%)
 Frame = -2

Query: 270 DIILWSVVIAGYGMHGHGETALTLFNQMVQSGVAPNEVTFTSALHACSHAGLVDEGLSLF 91
           DII WS +IAGYGMHGHGETA++LF+QMVQSGV PNE+TFTS LHACSHAGLVDEGL LF
Sbjct: 493 DIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLF 552

Query: 90  KFMLKIQKSIPKADHYTCMVDLLGRAGRLE 1
           KFML+  +   + DHYTC++DLLGRAGRLE
Sbjct: 553 KFMLEDNQMSLRTDHYTCVIDLLGRAGRLE 582


>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  150 bits (378), Expect = 1e-34
 Identities = 67/90 (74%), Positives = 80/90 (88%)
 Frame = -2

Query: 270 DIILWSVVIAGYGMHGHGETALTLFNQMVQSGVAPNEVTFTSALHACSHAGLVDEGLSLF 91
           DI +WS++IAGYGMHGHGETA++LF QMVQSGV PN+VTFTS L +CSHAG+VD+GL LF
Sbjct: 491 DIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLF 550

Query: 90  KFMLKIQKSIPKADHYTCMVDLLGRAGRLE 1
           KFMLK  ++IP  DHYTCMVDLLGRAGR++
Sbjct: 551 KFMLKDHQTIPNDDHYTCMVDLLGRAGRMD 580


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/90 (73%), Positives = 79/90 (87%)
 Frame = -2

Query: 270 DIILWSVVIAGYGMHGHGETALTLFNQMVQSGVAPNEVTFTSALHACSHAGLVDEGLSLF 91
           DII+WSV+IAGYGMHGHGETA+ LFNQMV SG+ PNE+TFTS LHACSH GLVD+GL+LF
Sbjct: 526 DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLF 585

Query: 90  KFMLKIQKSIPKADHYTCMVDLLGRAGRLE 1
           K+M++   S P  +HYTC+VDLLGRAGRL+
Sbjct: 586 KYMIENYPSSPLPNHYTCVVDLLGRAGRLD 615


>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/90 (73%), Positives = 79/90 (87%)
 Frame = -2

Query: 270 DIILWSVVIAGYGMHGHGETALTLFNQMVQSGVAPNEVTFTSALHACSHAGLVDEGLSLF 91
           DII+WSV+IAGYGMHGHGETA+ LFNQMV SG+ PNE+TFTS LHACSH GLVD+GL+LF
Sbjct: 554 DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLF 613

Query: 90  KFMLKIQKSIPKADHYTCMVDLLGRAGRLE 1
           K+M++   S P  +HYTC+VDLLGRAGRL+
Sbjct: 614 KYMIENYPSSPLPNHYTCVVDLLGRAGRLD 643


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