BLASTX nr result

ID: Cnidium21_contig00037774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037774
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24229.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]    76   3e-12
ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10

>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   MKELGLKKNPGCSWMEIDGRIKPFFVEDTEISQQDMTYTCLSILASHMEKDELV 162
           +KELGLKKNPGCSW+E+  RI PF VED    Q DM Y C+SILASH+EK +++
Sbjct: 492 IKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVL 545


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   MKELGLKKNPGCSWMEIDGRIKPFFVEDTEISQQDMTYTCLSILASHMEKDELV 162
           +KELGLKKNPGCSW+E+  RI PF VED    Q DM Y C+SILASH+EK +++
Sbjct: 639 IKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVL 692


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   MKELGLKKNPGCSWMEIDGRIKPFFVEDTEISQQDMTYTCLSILASHMEKDELV 162
           +KELGLKKNPGCSW+E+  RI PF VED    Q DM Y C+SILASH+EK +++
Sbjct: 831 IKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVL 884


>ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
           gi|449481162|ref|XP_004156100.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = +1

Query: 1   MKELGLKKNPGCSWMEIDGRIKPFFVEDTEISQQDMTYTCLSILASHMEKDEL 159
           MKELGLKK+PGCSW+EI+ RI PFF ED      D  Y CL+IL  HMEK+EL
Sbjct: 639 MKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHMEKNEL 691


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = +1

Query: 1   MKELGLKKNPGCSWMEIDGRIKPFFVEDTEISQQDMTYTCLSILASHMEKDELVVDDLHL 180
           MKELGLKKNPGCSW+EI+ +I PFFVED      ++ + CLS L+ HME DE      HL
Sbjct: 639 MKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHME-DESKSFTYHL 697

Query: 181 A*PSVSLY 204
              ++ LY
Sbjct: 698 DVETLRLY 705


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