BLASTX nr result

ID: Cnidium21_contig00037773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037773
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   203   3e-50
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   200   2e-49
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   199   4e-49
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855...   197   1e-48
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   195   6e-48

>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  203 bits (516), Expect = 3e-50
 Identities = 96/181 (53%), Positives = 132/181 (72%), Gaps = 3/181 (1%)
 Frame = -1

Query: 654  RVLRYLKGTPYQGLFYPSTSSLSLSAYCDSDWGSCVDTARSVSGYCLLLGSSLVSWQSKK 475
            R+LRYLKG P  GLF+PS S L L AY DSDW  C D+ RSV+G+C+ LG+SLVSW+SKK
Sbjct: 1107 RILRYLKGNPGMGLFFPSNSELRLMAYTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKK 1166

Query: 474  EKVVSRSTAESELRSLADTSCELSWMHLLLSELHIPQTRPTVIHCDNKAALDIAEDPVFH 295
            + +VSRS+AE+E R++A+TSCE++W+  LL +  I  + P ++ CDN++AL +AE+PVFH
Sbjct: 1167 QHIVSRSSAEAEYRAMANTSCEITWLLALLKDFGIDHSAPALLFCDNQSALHMAENPVFH 1226

Query: 294  PRTKHFAIDCHFVRQQVQMKLLQPIYVPTSQ*LADVLTKGLSRSSHWHILSRL---NVLS 124
             RTKH  IDCH VR +VQ  +L+P++V T   LAD LTK L  SS   ++ ++   N+ S
Sbjct: 1227 ERTKHIEIDCHLVRDKVQSGVLKPMFVSTEHQLADXLTKALHPSSFKLLIGKMGLKNIFS 1286

Query: 123  P 121
            P
Sbjct: 1287 P 1287


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  200 bits (509), Expect = 2e-49
 Identities = 94/173 (54%), Positives = 128/173 (73%)
 Frame = -1

Query: 654  RVLRYLKGTPYQGLFYPSTSSLSLSAYCDSDWGSCVDTARSVSGYCLLLGSSLVSWQSKK 475
            RVLRY+KG+P QGLF PS ++L+LSA+CDSDWG C  + RSVSGYC+ LGSSL+SW+SKK
Sbjct: 1548 RVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKK 1607

Query: 474  EKVVSRSTAESELRSLADTSCELSWMHLLLSELHIPQTRPTVIHCDNKAALDIAEDPVFH 295
            +  VSRS+AE+E R++A+T  EL+W+  +L +L +   +P  + CDN+AAL IA +PVFH
Sbjct: 1608 QTNVSRSSAEAEYRAMANTCLELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFH 1667

Query: 294  PRTKHFAIDCHFVRQQVQMKLLQPIYVPTSQ*LADVLTKGLSRSSHWHILSRL 136
             RTKH  IDCH VR+++Q  +++P YV T   LADV TK L R     + ++L
Sbjct: 1668 ERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQLADVFTKALGREQFEFLCTKL 1720


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  199 bits (506), Expect = 4e-49
 Identities = 90/184 (48%), Positives = 132/184 (71%)
 Frame = -1

Query: 654  RVLRYLKGTPYQGLFYPSTSSLSLSAYCDSDWGSCVDTARSVSGYCLLLGSSLVSWQSKK 475
            +VLRY+K TP QG+F PST  L L+AYCD+DW  C DT RS +GYC+  G++ +SW++KK
Sbjct: 1297 KVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKK 1356

Query: 474  EKVVSRSTAESELRSLADTSCELSWMHLLLSELHIPQTRPTVIHCDNKAALDIAEDPVFH 295
            +  VSRS+AE+E RS+A T CE++W+  LL++L++       + CDN+AA+ IA +PVFH
Sbjct: 1357 QGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVKLFCDNQAAIHIASNPVFH 1416

Query: 294  PRTKHFAIDCHFVRQQVQMKLLQPIYVPTSQ*LADVLTKGLSRSSHWHILSRLNVLSPHS 115
             RTKH  +DCH VR++VQ  L++ +++ T +  AD+ TK LS      +LS+L V++ H+
Sbjct: 1417 ERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADLFTKPLSSKQFSTLLSKLGVINIHT 1476

Query: 114  NLRG 103
            NLRG
Sbjct: 1477 NLRG 1480


>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
          Length = 1011

 Score =  197 bits (501), Expect = 1e-48
 Identities = 89/184 (48%), Positives = 132/184 (71%)
 Frame = -1

Query: 654  RVLRYLKGTPYQGLFYPSTSSLSLSAYCDSDWGSCVDTARSVSGYCLLLGSSLVSWQSKK 475
            +VLRY+K TP QG+F PST  L L+AYCD+DW  C DT RS +GYC+  G++ +SW++KK
Sbjct: 824  KVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKK 883

Query: 474  EKVVSRSTAESELRSLADTSCELSWMHLLLSELHIPQTRPTVIHCDNKAALDIAEDPVFH 295
            +  VSRS+AE+E RS+A T CE++W+  LL++L++       + CDN+AA+ IA +PVFH
Sbjct: 884  QGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVKLFCDNQAAIHIASNPVFH 943

Query: 294  PRTKHFAIDCHFVRQQVQMKLLQPIYVPTSQ*LADVLTKGLSRSSHWHILSRLNVLSPHS 115
             RTKH  +DCH VR++VQ  L++ +++ T +  A++ TK LS      +LS+L V++ H+
Sbjct: 944  ERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPANLFTKPLSSKQFSTLLSKLGVINIHT 1003

Query: 114  NLRG 103
            NLRG
Sbjct: 1004 NLRG 1007


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  195 bits (496), Expect = 6e-48
 Identities = 93/180 (51%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
 Frame = -1

Query: 654  RVLRYLKGTPYQGLFYPSTSSLSLSAYCDSDWGSCVDTARSVSGYCLLLGSSLVSWQSKK 475
            +VLRYLKG P QGL Y ++S L L+ + D+DWG+C D+ RSV+G+C+ LG+SL++W+SKK
Sbjct: 858  KVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLITWKSKK 917

Query: 474  EKVVSRSTAESELRSLADTSCELSWMHLLLSELHIPQTRPTVIHCDNKAALDIAEDPVFH 295
            + VVSRS+ ESE RSLA  +CE+ W+  LL +LH+  T P  + CDNK+AL +A +PVFH
Sbjct: 918  QSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATNPVFH 977

Query: 294  PRTKHFAIDCHFVRQQVQMKLLQPIYVPTSQ*LADVLTKGLS--RSSHWHILSRLNVLSP 121
             RTKH  IDCH VR Q++   L+ ++VPT   LAD+LTK L   +S  + +L R    SP
Sbjct: 978  ERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPVQSPIFSLLFRFTGTSP 1037


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