BLASTX nr result

ID: Cnidium21_contig00037742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037742
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|2235350...   169   3e-40
ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_003632136.1| PREDICTED: cell division control protein 6 h...   163   2e-38
emb|CBI15981.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002879226.1| predicted protein [Arabidopsis lyrata subsp....   135   3e-30

>ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|223535057|gb|EEF36739.1| cdc6,
           putative [Ricinus communis]
          Length = 523

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/151 (55%), Positives = 105/151 (69%), Gaps = 7/151 (4%)
 Frame = +3

Query: 42  SPQKRMLRSDSAKQ-------SSPMKLKSPRRFMIDSPNSPATRVKTELADKLTIKTPVK 200
           +PQKR LRS++          SSP+K KSPRR  + SPN+       ++  +   K+P K
Sbjct: 20  TPQKRTLRSNAGAAAVQESPVSSPVKWKSPRRCFVSSPNTTP-----DVGIEKMCKSPAK 74

Query: 201 KLSDSFLDKPIWNPTDVNQLSAVKEVLHVSTEQPTVVCREDEQKKILEFCKQCVKQEKSG 380
           KL D  +DK  WNP D+ Q+SAVKE LHVST   TVVCREDEQKK+ +FCK C++QEK+G
Sbjct: 75  KLCDDLIDKANWNPRDMEQMSAVKEALHVSTAPSTVVCREDEQKKVFDFCKACIEQEKAG 134

Query: 381 SLYVCGLPGTGKSLSMDKIKGSLIDWTQEEG 473
           SLYVCG PGTGKSLSM K+K  L+DWT+E G
Sbjct: 135 SLYVCGCPGTGKSLSMAKVKQQLVDWTKEAG 165


>ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|222847075|gb|EEE84622.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/152 (55%), Positives = 112/152 (73%), Gaps = 7/152 (4%)
 Frame = +3

Query: 39  SSPQKRMLRSDS------AKQSSPMKLKSPRRFMIDSPNSPATRVKTELADKLTIKTPVK 200
           ++PQKR LRS++      +  SSP+K KSPRR +  SPN+P   ++ +L  K   K+PVK
Sbjct: 26  TTPQKRRLRSNADLVMHESPISSPLKRKSPRRCVDSSPNTPTNGIE-KLEKKC--KSPVK 82

Query: 201 K-LSDSFLDKPIWNPTDVNQLSAVKEVLHVSTEQPTVVCREDEQKKILEFCKQCVKQEKS 377
           K LS++  +KP WNP DV Q+S VKEVLHVST   + VCREDEQK++ +FCK C++QEK+
Sbjct: 83  KELSNNLSEKPNWNPRDVKQVSVVKEVLHVSTAPSSAVCREDEQKRVFDFCKACIEQEKA 142

Query: 378 GSLYVCGLPGTGKSLSMDKIKGSLIDWTQEEG 473
           GSLYVCG PGTGKSLSM+K+K  L+DW +E G
Sbjct: 143 GSLYVCGCPGTGKSLSMEKVKQCLVDWAKEAG 174


>ref|XP_003632136.1| PREDICTED: cell division control protein 6 homolog [Vitis vinifera]
          Length = 497

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/160 (50%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   SSAAGEVQPHVNSSPQKRM-LRSDSAKQSSPMKLKSPRRFMIDSPNSPATRVKTELADKL 179
           S ++GEV+    S+PQKR  +        SP+K KSPRR +  SP +P+  ++ +   K 
Sbjct: 9   SESSGEVRSGSGSTPQKRRSISGGPISPPSPVKWKSPRRSVNGSPKTPSKEIEKDSDAKA 68

Query: 180 TI--KTPVKKLSDSFLDKPIWNPTDVNQLSAVKEVLHVSTEQPTVVCREDEQKKILEFCK 353
           T   K+P+K LS+ FLDK  WNP D  Q+SA KE LHVST   TVVCREDEQ +I++FCK
Sbjct: 69  TRLHKSPMKNLSEIFLDKSKWNPGDSKQMSAAKEALHVSTVPSTVVCREDEQNRIMDFCK 128

Query: 354 QCVKQEKSGSLYVCGLPGTGKSLSMDKIKGSLIDWTQEEG 473
            C++ EK+GSLY CG PGTGKSLSM+K++ +L+DW  + G
Sbjct: 129 ACIEHEKAGSLYACGCPGTGKSLSMEKVRRALVDWAGQAG 168


>emb|CBI15981.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/160 (50%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   SSAAGEVQPHVNSSPQKRM-LRSDSAKQSSPMKLKSPRRFMIDSPNSPATRVKTELADKL 179
           S ++GEV+    S+PQKR  +        SP+K KSPRR +  SP +P+  ++ +   K 
Sbjct: 9   SESSGEVRSGSGSTPQKRRSISGGPISPPSPVKWKSPRRSVNGSPKTPSKEIEKDSDAKA 68

Query: 180 TI--KTPVKKLSDSFLDKPIWNPTDVNQLSAVKEVLHVSTEQPTVVCREDEQKKILEFCK 353
           T   K+P+K LS+ FLDK  WNP D  Q+SA KE LHVST   TVVCREDEQ +I++FCK
Sbjct: 69  TRLHKSPMKNLSEIFLDKSKWNPGDSKQMSAAKEALHVSTVPSTVVCREDEQNRIMDFCK 128

Query: 354 QCVKQEKSGSLYVCGLPGTGKSLSMDKIKGSLIDWTQEEG 473
            C++ EK+GSLY CG PGTGKSLSM+K++ +L+DW  + G
Sbjct: 129 ACIEHEKAGSLYACGCPGTGKSLSMEKVRRALVDWAGQAG 168


>ref|XP_002879226.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325065|gb|EFH55485.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score =  135 bits (341), Expect = 3e-30
 Identities = 76/158 (48%), Positives = 100/158 (63%), Gaps = 10/158 (6%)
 Frame = +3

Query: 33  VNSSPQKRMLRSDSAKQSS--------PMKLKSPRRFMIDSPNSPATRVKTELADKLT-- 182
           VN+S +KR LRSDSA + +         MK KSPRR  I  P +    +K +    LT  
Sbjct: 14  VNTS-RKRKLRSDSAAEVAGTTVLPVNSMKWKSPRRCAISIPKTSDEEIKEDSNGNLTSP 72

Query: 183 IKTPVKKLSDSFLDKPIWNPTDVNQLSAVKEVLHVSTEQPTVVCREDEQKKILEFCKQCV 362
           + + VK LS     K  WNP D +Q+ AVKE LHVS    TVVCREDEQ+++ EF K C+
Sbjct: 73  VISAVKNLSVCLDVKSKWNPRDDDQMKAVKEALHVSKAPSTVVCREDEQRRVYEFVKGCM 132

Query: 363 KQEKSGSLYVCGLPGTGKSLSMDKIKGSLIDWTQEEGL 476
           +Q+K+GSLY+CG PGTGKSLSM+K++    DW ++ GL
Sbjct: 133 EQKKAGSLYICGCPGTGKSLSMEKVRQQAEDWAKQAGL 170


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