BLASTX nr result
ID: Cnidium21_contig00037737
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00037737
(569 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27138.3| unnamed protein product [Vitis vinifera] 287 7e-76
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei... 274 6e-72
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra... 271 7e-71
ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max] 265 3e-69
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ... 265 4e-69
>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
Length = 3960
Score = 287 bits (735), Expect = 7e-76
Identities = 140/189 (74%), Positives = 162/189 (85%)
Frame = +2
Query: 2 QLDDEGVFTLLFLKNVLDIDMYVWDDGVAEPRKMYSCSVKFANDDTVWHRQALLRLSKSA 181
QL +EGVF LLFLK+VL I+MY WD G +PRK+YSC+V ANDDTV HRQALLRLSK+
Sbjct: 229 QLYEEGVFALLFLKSVLSIEMYTWDAGEPDPRKIYSCTVSSANDDTVLHRQALLRLSKTI 288
Query: 182 NSSVGEIDAFSLDFLREAIHGNQSVKRIDTFYIVQKMAAASSRIGSFAATALKDYDIHLV 361
+S E+DAFSLDFL EAI GN KRIDTFYIVQKMA+ASS+IGSFAATA K+YDIHL+
Sbjct: 289 SSLKSEMDAFSLDFLSEAIIGNHLEKRIDTFYIVQKMASASSKIGSFAATASKEYDIHLL 348
Query: 362 PWASVAACISRKSSDEDDINTGRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKD 541
PWASVAAC+S SS+++ + GRAFCFLPLPV+TG+TVQVNGYFEVSSNRRGIWYG D D
Sbjct: 349 PWASVAACVSNDSSNDNVLKLGRAFCFLPLPVRTGMTVQVNGYFEVSSNRRGIWYGDDMD 408
Query: 542 RSGRIRSLW 568
RSG+IRS+W
Sbjct: 409 RSGKIRSMW 417
Score = 80.1 bits (196), Expect = 2e-13
Identities = 39/72 (54%), Positives = 47/72 (65%)
Frame = +2
Query: 353 HLVPWASVAACISRKSSDEDDINTGRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGA 532
+L+PWA VAA + + E GRAFCFLPLP+ TGL VN YFE+SSNRR IW+G
Sbjct: 1167 NLIPWACVAAYLHSVKNFE-----GRAFCFLPLPISTGLPAHVNAYFELSSNRRDIWFGN 1221
Query: 533 DKDRSGRIRSLW 568
D G+ RS W
Sbjct: 1222 DMAGGGKKRSEW 1233
>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
product [Arabidopsis thaliana]
gi|332005740|gb|AED93123.1| C3HC4-type RING finger
domain-containing protein [Arabidopsis thaliana]
Length = 4706
Score = 274 bits (701), Expect = 6e-72
Identities = 132/189 (69%), Positives = 158/189 (83%)
Frame = +2
Query: 2 QLDDEGVFTLLFLKNVLDIDMYVWDDGVAEPRKMYSCSVKFANDDTVWHRQALLRLSKSA 181
QL +EGVF+LLFLK VL I+MY WDDG +EP+K+YSCSV N+DTVWHRQA+LRLSK++
Sbjct: 218 QLFEEGVFSLLFLKCVLSIEMYTWDDGDSEPKKLYSCSVSSPNNDTVWHRQAVLRLSKTS 277
Query: 182 NSSVGEIDAFSLDFLREAIHGNQSVKRIDTFYIVQKMAAASSRIGSFAATALKDYDIHLV 361
S E+DAF+L+FL E+ GNQ+ +R D FYIVQ MA+ASS+IG FAATA K+YDIHL+
Sbjct: 278 ISGDREMDAFTLEFLSESEKGNQTKRRTDRFYIVQTMASASSKIGLFAATASKEYDIHLL 337
Query: 362 PWASVAACISRKSSDEDDINTGRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKD 541
PWASVAACIS SS+ + + G AFCFLPLPV+TGLTVQVNGYFEVSSNRRGIWYG D D
Sbjct: 338 PWASVAACISDDSSENNILKLGHAFCFLPLPVRTGLTVQVNGYFEVSSNRRGIWYGEDMD 397
Query: 542 RSGRIRSLW 568
RSG++RS W
Sbjct: 398 RSGKVRSAW 406
Score = 76.3 bits (186), Expect = 3e-12
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 21/92 (22%)
Frame = +2
Query: 356 LVPWASVAACI-SRKSSDEDDINT--------------------GRAFCFLPLPVKTGLT 472
L+PWASVA I S K+ + +D+ GRAFCFLPLP+ TGL
Sbjct: 1719 LIPWASVAVHINSVKNENVEDLAASISNIFGPSTISIQNRRNFGGRAFCFLPLPITTGLP 1778
Query: 473 VQVNGYFEVSSNRRGIWYGADKDRSGRIRSLW 568
+N YFE+SSNRR +W+G D G++RS W
Sbjct: 1779 AHINAYFELSSNRRDLWFGNDMAGDGKVRSDW 1810
>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317873|gb|EFH48295.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 4711
Score = 271 bits (692), Expect = 7e-71
Identities = 131/189 (69%), Positives = 157/189 (83%)
Frame = +2
Query: 2 QLDDEGVFTLLFLKNVLDIDMYVWDDGVAEPRKMYSCSVKFANDDTVWHRQALLRLSKSA 181
QL +EGVF+LLFLK VL I+MY WDDG EP+K+YSCSV ++DTVWHRQA+LRLSK++
Sbjct: 218 QLFEEGVFSLLFLKCVLSIEMYTWDDGDPEPKKLYSCSVSSPDNDTVWHRQAVLRLSKTS 277
Query: 182 NSSVGEIDAFSLDFLREAIHGNQSVKRIDTFYIVQKMAAASSRIGSFAATALKDYDIHLV 361
S E+DAF+L+FL E+ G+QS +R D FYIVQ MA+ASS+IG FAATA K+YDIHL+
Sbjct: 278 ISGDREMDAFTLEFLSESEKGSQSQRRTDRFYIVQTMASASSKIGLFAATASKEYDIHLL 337
Query: 362 PWASVAACISRKSSDEDDINTGRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKD 541
PWASVAACIS SS+ + + G AFCFLPLPV+TGLTVQVNGYFEVSSNRRGIWYG D D
Sbjct: 338 PWASVAACISDDSSENNILKLGHAFCFLPLPVRTGLTVQVNGYFEVSSNRRGIWYGEDMD 397
Query: 542 RSGRIRSLW 568
RSG++RS W
Sbjct: 398 RSGKVRSAW 406
Score = 78.2 bits (191), Expect = 9e-13
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 21/92 (22%)
Frame = +2
Query: 356 LVPWASVAACI-SRKSSDEDDINT--------------------GRAFCFLPLPVKTGLT 472
L+PWASVA I S KS + +D+ GRAFCFLPLP+ TGL
Sbjct: 1719 LIPWASVAVLINSVKSDNVEDLAASNSNIFGPSTISIQNRRNFGGRAFCFLPLPITTGLP 1778
Query: 473 VQVNGYFEVSSNRRGIWYGADKDRSGRIRSLW 568
+N YFE+SSNRR +W+G D G++RS W
Sbjct: 1779 AHINAYFELSSNRRDLWFGNDMAGDGKVRSDW 1810
>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
Length = 4760
Score = 265 bits (678), Expect = 3e-69
Identities = 127/189 (67%), Positives = 159/189 (84%)
Frame = +2
Query: 2 QLDDEGVFTLLFLKNVLDIDMYVWDDGVAEPRKMYSCSVKFANDDTVWHRQALLRLSKSA 181
QL +EGV TLLFLK+VL I+MY+WD G EP+K++SCSV DDTVWHRQALLRLSKS
Sbjct: 222 QLYEEGVLTLLFLKSVLCIEMYLWDAGEPEPKKIHSCSVSSVTDDTVWHRQALLRLSKSL 281
Query: 182 NSSVGEIDAFSLDFLREAIHGNQSVKRIDTFYIVQKMAAASSRIGSFAATALKDYDIHLV 361
N++ E+DAF LDFL E I+G++S ++ + FY+VQ MA+ASSRIGSFA++A K+YDIHL+
Sbjct: 282 NTTA-EVDAFPLDFLIERINGDESERQKERFYVVQTMASASSRIGSFASSASKEYDIHLL 340
Query: 362 PWASVAACISRKSSDEDDINTGRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKD 541
PWAS+AACIS S + + + TG+AFCFLPLPV+TGL+VQVNG+FEVSSNRRGIWYG D D
Sbjct: 341 PWASIAACISDNSQNNNILRTGQAFCFLPLPVRTGLSVQVNGFFEVSSNRRGIWYGDDMD 400
Query: 542 RSGRIRSLW 568
RSG++RS W
Sbjct: 401 RSGKVRSTW 409
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/108 (39%), Positives = 54/108 (50%), Gaps = 28/108 (25%)
Frame = +2
Query: 329 TALKDYDIHLVPWASVAACISRKSSDEDDINT---------------------------- 424
TA +Y + VPWA VAA ++ D D + +
Sbjct: 1713 TANSNY-YNFVPWACVAAYLNSVKLDGDLVESSELEDDCMVSPDLFKSVSLPTHPLENFD 1771
Query: 425 GRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKDRSGRIRSLW 568
GRAFCFLPLP+ TGL +N YFE+SSNRR IW+G+D GR RS W
Sbjct: 1772 GRAFCFLPLPISTGLPAHINAYFELSSNRRDIWFGSDMAGGGRKRSDW 1819
>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
Length = 3586
Score = 265 bits (677), Expect = 4e-69
Identities = 126/189 (66%), Positives = 160/189 (84%)
Frame = +2
Query: 2 QLDDEGVFTLLFLKNVLDIDMYVWDDGVAEPRKMYSCSVKFANDDTVWHRQALLRLSKSA 181
+L +EGV TLLFLK+VL I+M+VW+DG EP+K+YS S++ AN D +WHRQ LLRLSKS
Sbjct: 225 ELYEEGVLTLLFLKSVLCIEMFVWNDGETEPQKLYSFSLRSANSDIIWHRQMLLRLSKST 284
Query: 182 NSSVGEIDAFSLDFLREAIHGNQSVKRIDTFYIVQKMAAASSRIGSFAATALKDYDIHLV 361
S+ E+D+FSL+FL +A++G Q+ +RID+F+IVQ MA+ +SRIGSFAATA K+YDIHL+
Sbjct: 285 TSTQSEVDSFSLEFLSQAMNGTQTEERIDSFFIVQTMASTTSRIGSFAATASKEYDIHLL 344
Query: 362 PWASVAACISRKSSDEDDINTGRAFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKD 541
PWAS+A C + SS++ + GRAFCFLPLPVKTGLTVQVNG+FEVSSNRRGIWYGAD D
Sbjct: 345 PWASLAVC-TTASSNDSVLKLGRAFCFLPLPVKTGLTVQVNGFFEVSSNRRGIWYGADMD 403
Query: 542 RSGRIRSLW 568
RSG+IRS+W
Sbjct: 404 RSGKIRSIW 412
Score = 82.8 bits (203), Expect = 4e-14
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 46/226 (20%)
Frame = +2
Query: 29 LLFLKNVLDIDMYVWDDGVAEPRKMYSCSVKFANDDTVWHRQALLRLSKSANSSVGEIDA 208
L+FL NV I +++ DD E + +Y ++ T ++ + GE+D
Sbjct: 1606 LVFLTNVKTISIFIKDDIGHEMQCLYRVHKNTISEPTTKSTAQQDIMNFIYGNRRGEMDR 1665
Query: 209 FSLDFLREAIHGNQSVKRIDTFYIVQKMAAASSRIGSFAA------------------TA 334
FL + N+S+ + D Y+ QK+ G +
Sbjct: 1666 EQ--FLTKL---NKSINK-DLPYMCQKLIITEKGSGGDILQHFWISSGCLGGGLPRNNSG 1719
Query: 335 LKDYDIHLVPWASVAACISRKSSDED---DINT-------------------------GR 430
+ D + +PWASVAA + DE+ D T GR
Sbjct: 1720 VGDRSYNFIPWASVAALLHTVKVDEEMNHDPETENNWLAASDLVQVSSASVQDRKPLEGR 1779
Query: 431 AFCFLPLPVKTGLTVQVNGYFEVSSNRRGIWYGADKDRSGRIRSLW 568
AFCFLPLP+KTGL V VN YFE+SSNRR IWYG D GR RS W
Sbjct: 1780 AFCFLPLPIKTGLPVHVNAYFELSSNRRDIWYGDDMAGGGRKRSEW 1825