BLASTX nr result

ID: Cnidium21_contig00037700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037700
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298674.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002537518.1| RALFL33, putative [Ricinus communis] gi|2235...    91   1e-16
ref|XP_002328913.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|AFK33335.1| unknown [Lotus japonicus]                               89   3e-16
ref|XP_003629616.1| hypothetical protein MTR_8g083150 [Medicago ...    84   9e-15

>ref|XP_002298674.1| predicted protein [Populus trichocarpa]
           gi|224093898|ref|XP_002334815.1| predicted protein
           [Populus trichocarpa] gi|222845932|gb|EEE83479.1|
           predicted protein [Populus trichocarpa]
           gi|222875097|gb|EEF12228.1| predicted protein [Populus
           trichocarpa]
          Length = 84

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -1

Query: 259 RLLTEKKKFITPGVLKRDQPVCNGGSRGQSYSSSCLPPPSNSYNRGCSKIYRCRS 95
           R L EK+K+I+PG LK DQPVCN G+ GQSYSSSCLPPPSNS +RGCSK YRCRS
Sbjct: 29  RYLEEKRKYISPGALKPDQPVCNEGASGQSYSSSCLPPPSNSPSRGCSKYYRCRS 83


>ref|XP_002537518.1| RALFL33, putative [Ricinus communis] gi|223516053|gb|EEF24865.1|
           RALFL33, putative [Ricinus communis]
          Length = 91

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = -1

Query: 283 MEWERREGRLLTEKKKFITPGVLKRDQPVCNGGSRGQSYSSSCLPPPSNSYNRGCSKIYR 104
           M  E    R    +KK+I+PG LKRDQPVCNGG+ GQSYSSSCLPP SN + RGCSK Y+
Sbjct: 27  MLMESEISRRFLAEKKYISPGALKRDQPVCNGGANGQSYSSSCLPPSSNPHTRGCSKYYQ 86

Query: 103 CRS 95
           CRS
Sbjct: 87  CRS 89


>ref|XP_002328913.1| predicted protein [Populus trichocarpa] gi|222839343|gb|EEE77680.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = -1

Query: 259 RLLTEKKKFITPGVLKRDQPVCNGGSRGQSYSSSCLPPPSNSYNRGCSKIYRCRS 95
           R L EK+K+I+PG LK ++PVCNGG+ GQSYSSSCLPPPSN  +RGCSK Y CRS
Sbjct: 56  RFLEEKRKYISPGALKPNRPVCNGGASGQSYSSSCLPPPSNPPSRGCSKYYHCRS 110


>gb|AFK33335.1| unknown [Lotus japonicus]
          Length = 113

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
 Frame = -1

Query: 289 DMMEWERREGRLLTEKKKFITPGVLKRDQPVCNGGSRGQSYSSS--CLPPPSNSYNRGCS 116
           D +  E    R   E++++I+PG LKRD+PVCNGG+ G++YS S  CLPPPSN YNRGCS
Sbjct: 45  DELLMESEISRRFLEERRYISPGALKRDKPVCNGGASGEAYSKSGGCLPPPSNPYNRGCS 104

Query: 115 KIYRCRS 95
           K YRCRS
Sbjct: 105 KYYRCRS 111


>ref|XP_003629616.1| hypothetical protein MTR_8g083150 [Medicago truncatula]
           gi|217075308|gb|ACJ86014.1| unknown [Medicago
           truncatula] gi|355523638|gb|AET04092.1| hypothetical
           protein MTR_8g083150 [Medicago truncatula]
           gi|388514669|gb|AFK45396.1| unknown [Medicago
           truncatula]
          Length = 119

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/62 (59%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
 Frame = -1

Query: 274 ERREGRLLTEKKKFITPGVLKRDQPVCNGGSRGQSYSSS--CLPPPSNSYNRGCSKIYRC 101
           E    R   E++++I+ G LKRD+PVCNGG+ G++YS S  C+PPPSN YNRGCSK YRC
Sbjct: 56  ESEISRRFLEQRRYISEGALKRDKPVCNGGAGGEAYSKSAGCIPPPSNPYNRGCSKYYRC 115

Query: 100 RS 95
           RS
Sbjct: 116 RS 117


Top