BLASTX nr result

ID: Cnidium21_contig00037671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037671
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK95676.1|AC087723_9 Putative retrotransposable elements TNP...    72   8e-17
gb|AAM01138.1|AC108884_20 Putative transposase [Oryza sativa Jap...    72   1e-16
emb|CCI55435.1| PH01B031C15.18 [Phyllostachys edulis]                  75   2e-16
gb|AAO37998.1| putative TNP-like transposable element [Oryza sat...    72   2e-16
gb|ABF99296.1| transposon protein, putative, CACTA, En/Spm sub-c...    72   2e-16

>gb|AAK95676.1|AC087723_9 Putative retrotransposable elements TNP2 [Oryza sativa]
           gi|31430281|gb|AAP52215.1| transposon protein, putative,
           CACTA, En/Spm sub-class [Oryza sativa Japonica Group]
          Length = 808

 Score = 72.0 bits (175), Expect(2) = 8e-17
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +3

Query: 3   PFERFLCTLKAYVRNRYRPXXXXXXXXXXXXXXXFCTEYLAVVDPIGIPKSRHEGRLEGQ 182
           PFER++  LK+YVRNR +P               FC  Y++  DPIG+P SRHEGRL G 
Sbjct: 107 PFERYMGVLKSYVRNRAKPEGSIIEGYTTEEAIEFCVNYMSDADPIGVPASRHEGRLSGV 166

Query: 183 GTLGKK 200
           GT+G+K
Sbjct: 167 GTIGRK 172



 Score = 39.7 bits (91), Expect(2) = 8e-17
 Identities = 19/38 (50%), Positives = 23/38 (60%)
 Frame = +2

Query: 188 IGKKMISPNAELCERVHLFVLQHMT*VDPYLKEHIALI 301
           IG+K I P+     + H  VLQHM  V PY KEH+A I
Sbjct: 169 IGRKRIRPDQASYAQAHYAVLQHMAEVGPYFKEHLAKI 206


>gb|AAM01138.1|AC108884_20 Putative transposase [Oryza sativa Japonica Group]
           gi|31431901|gb|AAP53613.1| transposon protein, putative,
           CACTA, En/Spm sub-class [Oryza sativa Japonica Group]
          Length = 997

 Score = 72.0 bits (175), Expect(2) = 1e-16
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +3

Query: 3   PFERFLCTLKAYVRNRYRPXXXXXXXXXXXXXXXFCTEYLAVVDPIGIPKSRHEGRLEGQ 182
           PFER++  LK+YVRNR +P               FC  Y++  DPIG+P SRHEGRL G 
Sbjct: 687 PFERYMGVLKSYVRNRAKPEGSIIEGYTTEEAIEFCVNYMSDADPIGVPASRHEGRLSGV 746

Query: 183 GTLGKK 200
           GT+G+K
Sbjct: 747 GTIGRK 752



 Score = 38.9 bits (89), Expect(2) = 1e-16
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +2

Query: 188 IGKKMISPNAELCERVHLFVLQHMT*VDPYLKEHIALI 301
           IG+K I P+     + H  VLQH+T V PY +EH+A I
Sbjct: 749 IGRKRIRPDQTSYAQAHYVVLQHITEVGPYFEEHLAKI 786


>emb|CCI55435.1| PH01B031C15.18 [Phyllostachys edulis]
          Length = 1369

 Score = 74.7 bits (182), Expect(2) = 2e-16
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = +3

Query: 6   FERFLCTLKAYVRNRYRPXXXXXXXXXXXXXXXFCTEYLAVVDPIGIPKSRHEGRLEGQG 185
           FERF+  LK+YV+NR RP               FC +Y+A V+PIG+P+SRHEGRLEG G
Sbjct: 495 FERFMGILKSYVQNRSRPDGSIVEGYATEEVIEFCVDYMAQVEPIGVPRSRHEGRLEGIG 554

Query: 186 TLGKK 200
           T+G+K
Sbjct: 555 TIGRK 559



 Score = 35.8 bits (81), Expect(2) = 2e-16
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 188 IGKKMISPNAELCERVHLFVLQHMT*VDPYLKEH 289
           IG+K I+ + +   + H  VLQHMT V PY+ +H
Sbjct: 556 IGRKAITADMDAYAQAHFTVLQHMTEVSPYIDQH 589


>gb|AAO37998.1| putative TNP-like transposable element [Oryza sativa Japonica
           Group]
          Length = 883

 Score = 72.0 bits (175), Expect(2) = 2e-16
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +3

Query: 3   PFERFLCTLKAYVRNRYRPXXXXXXXXXXXXXXXFCTEYLAVVDPIGIPKSRHEGRLEGQ 182
           PFER++  LK+YVRNR +P               FC  Y++  DPIG+P SRHEGRL G 
Sbjct: 580 PFERYMGVLKSYVRNRAKPEGSIIEGYTTEEAIEFCVNYMSDADPIGVPASRHEGRLSGV 639

Query: 183 GTLGKK 200
           GT+G+K
Sbjct: 640 GTIGRK 645



 Score = 38.1 bits (87), Expect(2) = 2e-16
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +2

Query: 188 IGKKMISPNAELCERVHLFVLQHMT*VDPYLKEHIALI 301
           IG+K I P+     + H  VLQHM  V PY +EH+A I
Sbjct: 642 IGRKRIRPDQASYTQAHYAVLQHMAEVGPYFEEHLAKI 679


>gb|ABF99296.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 592

 Score = 72.0 bits (175), Expect(2) = 2e-16
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +3

Query: 3   PFERFLCTLKAYVRNRYRPXXXXXXXXXXXXXXXFCTEYLAVVDPIGIPKSRHEGRLEGQ 182
           PFER++  LK+YVRNR +P               FC  Y++  DPIG+P SRHEGRL G 
Sbjct: 289 PFERYMGVLKSYVRNRAKPEGSIIEGYTTEEAIEFCVNYMSDADPIGVPASRHEGRLSGV 348

Query: 183 GTLGKK 200
           GT+G+K
Sbjct: 349 GTIGRK 354



 Score = 38.1 bits (87), Expect(2) = 2e-16
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +2

Query: 188 IGKKMISPNAELCERVHLFVLQHMT*VDPYLKEHIALI 301
           IG+K I P+     + H  VLQHM  V PY +EH+A I
Sbjct: 351 IGRKRIRPDQASYTQAHYAVLQHMAEVGPYFEEHLAKI 388


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