BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037667
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              360   2e-97
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   360   2e-97
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   350   2e-94
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   347   2e-93
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   345   5e-93

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  360 bits (923), Expect = 2e-97
 Identities = 172/228 (75%), Positives = 200/228 (87%), Gaps = 3/228 (1%)
 Frame = -2

Query: 685  PVLLETIIKGDPRVCTADIIWVSPDTTSWIRNRSSSEKGELAIDVALDKKSVKQTGDAWR 506
            PVLL+TIIKGD RVCT +IIW+SPDTT+WIRN   S KGELA+D+ L+K +VKQ GDAWR
Sbjct: 1093 PVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWR 1152

Query: 505  IVLDSCLPVIHLIDTRRSVPYSVKQVQELLGISCAFEQAIQRLSASVTMVTKGVLREHLI 326
            IVLD+CLPV+HLIDTRRS+PY++KQVQELLGISCAF+QA+QRLS SVTMV KGVL+EHLI
Sbjct: 1153 IVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLI 1212

Query: 325  LLANSMTYSGNLVGFNKAGIKALSRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLASI 146
            LLANSMT +GNL+GFN  G KALSR+LN+QVPFTEATLFTP+KCFE A+EKCH DSL+SI
Sbjct: 1213 LLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSI 1272

Query: 145  VASCSWGKHVAVGTGSSFDLLWDTRE---AELKGTDVYDFLNLVHSSS 11
            VASCSWGKHV VGTGS FD+LWDT+E   A+  G D+Y FL+LV S S
Sbjct: 1273 VASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGS 1320


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  360 bits (923), Expect = 2e-97
 Identities = 172/228 (75%), Positives = 200/228 (87%), Gaps = 3/228 (1%)
 Frame = -2

Query: 685  PVLLETIIKGDPRVCTADIIWVSPDTTSWIRNRSSSEKGELAIDVALDKKSVKQTGDAWR 506
            PVLL+TIIKGD RVCT +IIW+SPDTT+WIRN   S KGELA+D+ L+K +VKQ GDAWR
Sbjct: 1033 PVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWR 1092

Query: 505  IVLDSCLPVIHLIDTRRSVPYSVKQVQELLGISCAFEQAIQRLSASVTMVTKGVLREHLI 326
            IVLD+CLPV+HLIDTRRS+PY++KQVQELLGISCAF+QA+QRLS SVTMV KGVL+EHLI
Sbjct: 1093 IVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLI 1152

Query: 325  LLANSMTYSGNLVGFNKAGIKALSRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLASI 146
            LLANSMT +GNL+GFN  G KALSR+LN+QVPFTEATLFTP+KCFE A+EKCH DSL+SI
Sbjct: 1153 LLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSI 1212

Query: 145  VASCSWGKHVAVGTGSSFDLLWDTRE---AELKGTDVYDFLNLVHSSS 11
            VASCSWGKHV VGTGS FD+LWDT+E   A+  G D+Y FL+LV S S
Sbjct: 1213 VASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGS 1260


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  350 bits (897), Expect = 2e-94
 Identities = 166/226 (73%), Positives = 196/226 (86%), Gaps = 3/226 (1%)
 Frame = -2

Query: 685  PVLLETIIKGDPRVCTADIIWVSPDTTSWIRNRSSSEKGELAIDVALDKKSVKQTGDAWR 506
            PVL ETIIKGDPR+ +A IIWVSPDT +W+RN   S  GELA+D+ L++++VKQ+GDAWR
Sbjct: 1030 PVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYKSSNGELALDIVLEEEAVKQSGDAWR 1089

Query: 505  IVLDSCLPVIHLIDTRRSVPYSVKQVQELLGISCAFEQAIQRLSASVTMVTKGVLREHLI 326
            IVLDSCLPV+HLIDTRRS+PY++KQ+QELLGISC F+QAIQR++ASV MV KGVLREHLI
Sbjct: 1090 IVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLI 1149

Query: 325  LLANSMTYSGNLVGFNKAGIKALSRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLASI 146
            LLA+SMT  GNLVGFN  G KALSR LN+QVPFT+ATLFTPKKCFE AAEKCH DSL+SI
Sbjct: 1150 LLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSI 1209

Query: 145  VASCSWGKHVAVGTGSSFDLLWDTREA---ELKGTDVYDFLNLVHS 17
            VASCSWGKHVAVGTGS FD++WD+ E    E++G DVY FL++V S
Sbjct: 1210 VASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDVYSFLHMVKS 1255


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  347 bits (889), Expect = 2e-93
 Identities = 162/227 (71%), Positives = 204/227 (89%), Gaps = 2/227 (0%)
 Frame = -2

Query: 685  PVLLETIIKGDPRVCTADIIWVSPDTTSWIRNRSSSEKGELAIDVALDKKSVKQTGDAWR 506
            PVLL+TIIKGDPR+ T +IIW++P TT+W+++  SS KGELA++VAL+K++V+ TGDAWR
Sbjct: 831  PVLLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSSTKGELAVEVALEKEAVRLTGDAWR 890

Query: 505  IVLDSCLPVIHLIDTRRSVPYSVKQVQELLGISCAFEQAIQRLSASVTMVTKGVLREHLI 326
            IVLD CLPV HLIDTRRS+PY++KQ+Q+L GISCAF+QA+QRLS SVTMVTKGVL+EHL+
Sbjct: 891  IVLDCCLPVFHLIDTRRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLL 950

Query: 325  LLANSMTYSGNLVGFNKAGIKALSRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLASI 146
            LLA+SMT +GNLVGFN +GIKAL R+LNVQVPFTEATL+TP+KCFE A+EKCHVD+LASI
Sbjct: 951  LLASSMTCAGNLVGFNTSGIKALCRALNVQVPFTEATLYTPRKCFERASEKCHVDTLASI 1010

Query: 145  VASCSWGKHVAVGTGSSFDLLWDTREAEL--KGTDVYDFLNLVHSSS 11
            V SCSWGK V++GTG+ FDLLW+T+E E+  K TDVY+FL+LV S++
Sbjct: 1011 VGSCSWGKRVSIGTGAKFDLLWETKEIEMADKPTDVYNFLHLVSSAN 1057


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score =  345 bits (885), Expect = 5e-93
 Identities = 163/226 (72%), Positives = 195/226 (86%), Gaps = 3/226 (1%)
 Frame = -2

Query: 685  PVLLETIIKGDPRVCTADIIWVSPDTTSWIRNRSSSEKGELAIDVALDKKSVKQTGDAWR 506
            PVL +TII+GDPR+ +A IIWVSPDT +W+RN   S  GELA+D+ L+K++VKQ+GDAWR
Sbjct: 1046 PVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSSNGELALDIILEKEAVKQSGDAWR 1105

Query: 505  IVLDSCLPVIHLIDTRRSVPYSVKQVQELLGISCAFEQAIQRLSASVTMVTKGVLREHLI 326
            +VLD+CLPV+HLIDTRRS+PY++KQ+QELLGISC F+QAIQR++ASV MV KGVLREHLI
Sbjct: 1106 VVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLI 1165

Query: 325  LLANSMTYSGNLVGFNKAGIKALSRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLASI 146
            LLA+SMT  GNLVGFN  G KALSR LN+QVPFT+ATLFTPKKCFE AAEKCH DSL+SI
Sbjct: 1166 LLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSI 1225

Query: 145  VASCSWGKHVAVGTGSSFDLLWDTREA---ELKGTDVYDFLNLVHS 17
            VASCSWGKHVAVGTGS FD++WD  E    E++G DVY FL++V S
Sbjct: 1226 VASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFLHMVKS 1271