BLASTX nr result

ID: Cnidium21_contig00037652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037652
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...   166   2e-39
ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus ...   143   2e-32
ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase ac...   142   4e-32
ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase ac...   139   2e-31

>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|297743001|emb|CBI35868.3| unnamed
           protein product [Vitis vinifera]
          Length = 391

 Score =  166 bits (419), Expect = 2e-39
 Identities = 76/93 (81%), Positives = 86/93 (92%)
 Frame = +2

Query: 2   VEGNWKSLRTSNALVSPESGEKGVVLLRTQTCIYNEWRGFFGWTSDIRSLFARSWKEQES 181
           ++GNWKSLR  N LVS ESGEKGV+L RTQTCIYNEWRGFFGWTSDIR+LFARSWKE+ES
Sbjct: 95  IDGNWKSLRP-NVLVSHESGEKGVILQRTQTCIYNEWRGFFGWTSDIRTLFARSWKEKES 153

Query: 182 SSLRTVPFILVDGGIWPHSDYVVVNMNGSRHPI 280
           +SLRTVPFILV+GG WP SDYV+VNM+GSRHP+
Sbjct: 154 TSLRTVPFILVEGGRWPQSDYVIVNMDGSRHPL 186


>ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223539404|gb|EEF40994.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 387

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/94 (65%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   VEGNWKSL-RTSNALVSPESGEKGVVLLRTQTCIYNEWRGFFGWTSDIRSLFARSWKEQE 178
           V+GNWKSL   +N LV+ ESG+K V++ R QTCIYNEW+GFFGWTSDIR++F RSW+EQE
Sbjct: 88  VDGNWKSLIPNNNVLVAHESGDKAVIVQRIQTCIYNEWKGFFGWTSDIRAIFGRSWREQE 147

Query: 179 SSSLRTVPFILVDGGIWPHSDYVVVNMNGSRHPI 280
           S+  R+VPF+LV+ G WP SDYV+VN++GSRHP+
Sbjct: 148 STLSRSVPFVLVEAGRWPQSDYVIVNLDGSRHPL 181


>ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Glycine max]
          Length = 388

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/91 (68%), Positives = 79/91 (86%)
 Frame = +2

Query: 8   GNWKSLRTSNALVSPESGEKGVVLLRTQTCIYNEWRGFFGWTSDIRSLFARSWKEQESSS 187
           G WK+LR    LVS ESG+K V+L RTQTCIYNEW+G FGWTSD+R++FARSW++QES+S
Sbjct: 96  GTWKTLRPG-VLVSRESGDKSVILQRTQTCIYNEWKGLFGWTSDLRAIFARSWRQQESTS 154

Query: 188 LRTVPFILVDGGIWPHSDYVVVNMNGSRHPI 280
           LR VPF+L+D G WP+++YVVVNM+GSRHP+
Sbjct: 155 LRKVPFVLIDVGRWPNAEYVVVNMDGSRHPL 185


>ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|222840675|gb|EEE78222.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 75/88 (85%)
 Frame = +2

Query: 17  KSLRTSNALVSPESGEKGVVLLRTQTCIYNEWRGFFGWTSDIRSLFARSWKEQESSSLRT 196
           KS R SN L+S ESG+K V+L RTQTCIYNEW+GFFGWTSD+RS+F RS KEQE++ LRT
Sbjct: 99  KSSRDSNVLLSHESGDKAVILQRTQTCIYNEWKGFFGWTSDLRSIFGRSLKEQETTFLRT 158

Query: 197 VPFILVDGGIWPHSDYVVVNMNGSRHPI 280
           VPF LV+GG WP SDYV+VNM+GS HP+
Sbjct: 159 VPFTLVEGGQWPQSDYVIVNMDGSSHPL 186


>ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Glycine max]
          Length = 387

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/93 (67%), Positives = 80/93 (86%)
 Frame = +2

Query: 2   VEGNWKSLRTSNALVSPESGEKGVVLLRTQTCIYNEWRGFFGWTSDIRSLFARSWKEQES 181
           V+G WK+LR    LVS ESG+KGV+L RTQTCIYNEW+G FGWTSD+R++FARSW++QES
Sbjct: 93  VDGTWKTLRPG-VLVSRESGDKGVILQRTQTCIYNEWKGLFGWTSDLRAIFARSWRQQES 151

Query: 182 SSLRTVPFILVDGGIWPHSDYVVVNMNGSRHPI 280
           +SLR VPF+L D G  P+++YVVVNM+GSRHP+
Sbjct: 152 TSLRKVPFLLTDVGRRPNAEYVVVNMDGSRHPL 184


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