BLASTX nr result

ID: Cnidium21_contig00037620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037620
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518124.1| chromosome transmission fidelity factor, put...    90   2e-16
ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ...    88   6e-16
ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity ...    88   8e-16
ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
emb|CBI38383.3| unnamed protein product [Vitis vinifera]               85   5e-15

>ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
           communis] gi|223542720|gb|EEF44257.1| chromosome
           transmission fidelity factor, putative [Ricinus
           communis]
          Length = 813

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = -3

Query: 280 PSPIPQVLETVEDEVFEEMIVSRYASQIDGDFVPVTGPCG-DRVYAKISRFGFVDSTKKN 104
           P P PQ +E +E  V EE I+S+Y S+IDGDF+P+T P G DRVYAKI R    +  KK 
Sbjct: 104 PPPPPQEVERMEVAV-EEKIISKYISEIDGDFIPITAPSGGDRVYAKICRVETEERLKK- 161

Query: 103 KLDSNAYSSGLIAEPVSLLMQRVEQEAVEKAL 8
            LD  + S+GLI+EPV++L+QR+EQEA  KAL
Sbjct: 162 -LDMKSQSNGLISEPVNVLLQRMEQEAFTKAL 192


>ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Vitis vinifera]
          Length = 948

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
 Frame = -3

Query: 286 WLPSPIPQVLETVEDE--VFEEMIVSRYASQIDGDFVPVTGPCGDRVYAKISRFGFVDST 113
           WL   +PQ  +   +   V EE IVSRYAS+IDGD +PVTGP GDRVY KIS  G     
Sbjct: 91  WLRYSLPQDSDGDLEPMVVDEERIVSRYASEIDGDCIPVTGPGGDRVYLKISATG--SDG 148

Query: 112 KKNKLDSNAYSSGLIAEPVSLLMQRVEQEAVEKAL 8
           +  KLD    + GLI EP+S+LMQRVEQ+A  KAL
Sbjct: 149 RLKKLDLEGRTKGLILEPISVLMQRVEQDAFTKAL 183


>ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Glycine max]
          Length = 966

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
 Frame = -3

Query: 286 WL---PSPIPQVLETVEDEVFE-EMIVSRYASQIDGDFVPVTGPCGDRVYAKISRFGFVD 119
           WL   P P+P+    VE+  FE E  +SRYAS+IDG+ +P+T P G+RVYAK++R  F  
Sbjct: 104 WLRYSPPPVPEGEPAVEEMAFEKEKTLSRYASEIDGECMPITAPSGNRVYAKLNR--FQG 161

Query: 118 STKKNKLDSNAYSSGLIAEPVSLLMQRVEQEAVEKAL 8
             +  KLD N YS+ L +EPV+++++R+EQEA  KAL
Sbjct: 162 EERVTKLDYNGYSTELSSEPVNVILERLEQEAFAKAL 198


>ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|222846535|gb|EEE84082.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = -3

Query: 259 LETVEDEVFEEMIVSRYASQIDGDFVPVTGPC-GDRVYAKISRFGFVDSTKKNKLDSNAY 83
           +E V +E  +E IVSRY S+IDGDF+PVT P  GDRVYAKI R       K  KLD  + 
Sbjct: 113 VEVVVEEEEKEKIVSRYVSEIDGDFIPVTAPSGGDRVYAKICRVDTEQGAK--KLDFKSQ 170

Query: 82  SSGLIAEPVSLLMQRVEQEAVEKAL 8
           S+GLI+EP+++L+QR+EQEA  KAL
Sbjct: 171 SNGLISEPINVLLQRMEQEAFTKAL 195


>emb|CBI38383.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/93 (53%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = -3

Query: 286 WLPSPIPQVLETVEDE--VFEEMIVSRYASQIDGDFVPVTGPCGDRVYAKISRFGFVDST 113
           WL   +PQ  +   +   V EE IVSRYAS+IDGD +PVTGP GDRVY KIS  G     
Sbjct: 91  WLRYSLPQDSDGDLEPMVVDEERIVSRYASEIDGDCIPVTGPGGDRVYLKISATG--SDG 148

Query: 112 KKNKLDSNAYSSGLIAEPVSLLMQRVEQEAVEK 14
           +  KLD    + GLI EP+S+LMQRVEQ+A  K
Sbjct: 149 RLKKLDLEGRTKGLILEPISVLMQRVEQDAFTK 181


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