BLASTX nr result

ID: Cnidium21_contig00037588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037588
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   112   2e-23
emb|CBI16338.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222...    98   8e-19
dbj|BAG70995.1| uncharacterized protein [Musa balbisiana] gi|199...    88   8e-16
gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]         82   3e-14

>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 14/144 (9%)
 Frame = -2

Query: 391 DVGSKYGHTATLSKRKRDSSTDLHTSSLPETSNEFET--------------CVMCSKRQR 254
           D   + G+     KRKR S  DL++ +    SN+                 C   SKRQR
Sbjct: 317 DTEVESGYKEMPFKRKR-SIEDLNSDATTMVSNKVADAAPYENGRTDSVAKCATSSKRQR 375

Query: 253 LCDGKYCKTSCHSSSLDPCTGDVLVGVWQCFQCLNNKMQAGACPLSANVEAIWNARETEI 74
            CDG+ CK S H S LDP  GDV +GVW C  C+  K++ G   +S  +E+IW+A E E+
Sbjct: 376 CCDGQGCKRSYHLSCLDPPLGDVPLGVWHCLACVRKKIEFGMHSVSKGIESIWDASEVEV 435

Query: 73  LDAKGLRKEKQYFVKYRGLAHIHN 2
            D  G++++KQ++VKY+GLAH+HN
Sbjct: 436 ADDNGVQRQKQFYVKYKGLAHVHN 459


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = -2

Query: 304 ETSNEFETCVMCSKRQRL--CDGKYCKTSCHSSSLDPCTGDVLVGVWQCFQCLNNKMQAG 131
           +T ++  TCV+C    +L  CDGK CK S H + LDP  G++  G+W C  C+  K + G
Sbjct: 439 QTGDDHNTCVVCKLGGKLLCCDGKGCKRSYHLACLDPPLGEIPPGIWHCMLCVKKKTELG 498

Query: 130 ACPLSANVEAIWNARETEILDAKGLRKEKQYFVKYRGLAHIHN 2
              +S  VE+IW+ RE E+  A+G++K+KQYFVKY+GLAH+HN
Sbjct: 499 VHAVSEGVESIWDTREVELPSAEGVQKQKQYFVKYKGLAHVHN 541


>ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222705 [Cucumis sativus]
          Length = 2887

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
 Frame = -2

Query: 280 CVMCSKRQRL--CDGKYCKTSCHSSSLDPCTGDVLVGVWQCFQCLNNKMQAGACPLSANV 107
           C++C    +L  C+GK C+ S H S LDP   DV +GVW C  C+  K++ G   +S   
Sbjct: 640 CLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIRRKIKFGVYAVSKGF 699

Query: 106 EAIWNARETEILDAKGLRKEKQYFVKYRGLAHIHN 2
           E+IW+ RETEI DA G +++KQYFVK++ LAH HN
Sbjct: 700 ESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHN 734


>dbj|BAG70995.1| uncharacterized protein [Musa balbisiana]
           gi|199601726|dbj|BAG70985.1| uncharacterized protein
           [Musa balbisiana]
          Length = 405

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = -2

Query: 283 TCVMCSKRQR--LCDGKYCKTSCHSSSLDPCTGDVLVGVWQCFQCLNNKMQAGACPLSAN 110
           TCV+C + +    CDGK C  S H S LDP   D L GVW C  C+  K++ G   +S  
Sbjct: 165 TCVVCRRPETDLSCDGKGCNRSYHLSCLDPPLQDTLPGVWLCIFCIKRKIEFGVYSVSEG 224

Query: 109 VEAIWNARETEILDAKGLRKEKQYFVKYRGLAHIHN 2
           +++IWN +E       GL+  K+Y VKY+GLAH+HN
Sbjct: 225 IDSIWNIKE-------GLQTGKRYLVKYKGLAHVHN 253


>gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]
          Length = 1990

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
 Frame = -2

Query: 304 ETSNEFETCVMCSKRQ-----RLCDGKYCKTSCHSSSLDPCTGDVLVGVWQCFQCLNNKM 140
           ET  +   CV+C  R+     + C GK CK   H S +DP   DV +G+W C  C+  ++
Sbjct: 61  ETWYDDNICVVCRSREISDILKSCGGKGCKRHYHLSCMDPSL-DVSLGIWLCIMCMKKRI 119

Query: 139 QAGACPLSANVEAIWNARETEILDAKGLRKEKQYFVKYRGLAHIHN 2
           Q G   +S  +E++W+ +E       G+   KQYFVKY+ LAH+HN
Sbjct: 120 QFGVYSVSEGIESLWDVKE-------GVVNSKQYFVKYKNLAHVHN 158


Top