BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037553
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24961.3| unnamed protein product [Vitis vinifera]              189   4e-46
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   189   4e-46
ref|XP_003599441.1| RNA polymerase sigma factor [Medicago trunca...   172   6e-41
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...   172   6e-41
ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago t...   171   8e-41

>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  189 bits (480), Expect = 4e-46
 Identities = 92/158 (58%), Positives = 126/158 (79%)
 Frame = -2

Query: 627 GSACELIPKIAEANNSLAVRLRRSPSFEEIAKSVGTTVRTVRLIYRSSKEPISLDRALTS 448
           GS CE++ KIAEA   L+ RLRR P+++EIA+ +   V TVRL+   S+ PIS+D+A+TS
Sbjct: 161 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 220

Query: 447 QGCMNLQDIMPGPDELTPETMLIKQHRKQELEKILNQLSDRESTIVRLHFGLNGETPRSF 268
           QGCM LQ+I+PGPDE TP+ M+ +Q  KQE+E+ LN L +RE+ I+RL+FG+NGETP SF
Sbjct: 221 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 280

Query: 267 EEIARVLKLSRERIRQINGNALSKLKQNSLVDDMEVYI 154
           EEI R++KLSRER+RQIN  ALSKL+Q S+VD +++Y+
Sbjct: 281 EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYM 318


>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  189 bits (480), Expect = 4e-46
 Identities = 92/158 (58%), Positives = 126/158 (79%)
 Frame = -2

Query: 627 GSACELIPKIAEANNSLAVRLRRSPSFEEIAKSVGTTVRTVRLIYRSSKEPISLDRALTS 448
           GS CE++ KIAEA   L+ RLRR P+++EIA+ +   V TVRL+   S+ PIS+D+A+TS
Sbjct: 268 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 327

Query: 447 QGCMNLQDIMPGPDELTPETMLIKQHRKQELEKILNQLSDRESTIVRLHFGLNGETPRSF 268
           QGCM LQ+I+PGPDE TP+ M+ +Q  KQE+E+ LN L +RE+ I+RL+FG+NGETP SF
Sbjct: 328 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 387

Query: 267 EEIARVLKLSRERIRQINGNALSKLKQNSLVDDMEVYI 154
           EEI R++KLSRER+RQIN  ALSKL+Q S+VD +++Y+
Sbjct: 388 EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYM 425


>ref|XP_003599441.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488489|gb|AES69692.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 267

 Score =  172 bits (435), Expect = 6e-41
 Identities = 88/158 (55%), Positives = 118/158 (74%)
 Frame = -2

Query: 627 GSACELIPKIAEANNSLAVRLRRSPSFEEIAKSVGTTVRTVRLIYRSSKEPISLDRALTS 448
           G    ++ KIAEANN L  RLRR P++ EIA+ +   V TV+L+   S++PISLDR++T 
Sbjct: 109 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 168

Query: 447 QGCMNLQDIMPGPDELTPETMLIKQHRKQELEKILNQLSDRESTIVRLHFGLNGETPRSF 268
           Q  + L++I+PGP E+ PE M+ +Q  KQ + K+LN L  RE  IVRL+FGLNGETP SF
Sbjct: 169 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 228

Query: 267 EEIARVLKLSRERIRQINGNALSKLKQNSLVDDMEVYI 154
           EEI ++LKLSRERIRQI+G ALSKL+QN+LVD ++ Y+
Sbjct: 229 EEIGKLLKLSRERIRQIHGIALSKLEQNTLVDSLKFYV 266


>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 403

 Score =  172 bits (435), Expect = 6e-41
 Identities = 88/158 (55%), Positives = 118/158 (74%)
 Frame = -2

Query: 627 GSACELIPKIAEANNSLAVRLRRSPSFEEIAKSVGTTVRTVRLIYRSSKEPISLDRALTS 448
           G    ++ KIAEANN L  RLRR P++ EIA+ +   V TV+L+   S++PISLDR++T 
Sbjct: 245 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 304

Query: 447 QGCMNLQDIMPGPDELTPETMLIKQHRKQELEKILNQLSDRESTIVRLHFGLNGETPRSF 268
           Q  + L++I+PGP E+ PE M+ +Q  KQ + K+LN L  RE  IVRL+FGLNGETP SF
Sbjct: 305 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 364

Query: 267 EEIARVLKLSRERIRQINGNALSKLKQNSLVDDMEVYI 154
           EEI ++LKLSRERIRQI+G ALSKL+QN+LVD ++ Y+
Sbjct: 365 EEIGKLLKLSRERIRQIHGIALSKLEQNTLVDSLKFYV 402


>ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355488477|gb|AES69680.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 185

 Score =  171 bits (434), Expect = 8e-41
 Identities = 87/158 (55%), Positives = 118/158 (74%)
 Frame = -2

Query: 627 GSACELIPKIAEANNSLAVRLRRSPSFEEIAKSVGTTVRTVRLIYRSSKEPISLDRALTS 448
           G    ++ KIAEANN L  RLRR P++ EIA+ +   V TV+L+   S++PISLDR++T 
Sbjct: 27  GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 86

Query: 447 QGCMNLQDIMPGPDELTPETMLIKQHRKQELEKILNQLSDRESTIVRLHFGLNGETPRSF 268
           Q  + L++I+PGP E+ PE M+ +Q  KQ + K+LN L  RE  IVRL+FGLNGETP SF
Sbjct: 87  QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 146

Query: 267 EEIARVLKLSRERIRQINGNALSKLKQNSLVDDMEVYI 154
           EEI ++LKLSRERIRQI+G ALSKL+QN++VD ++ Y+
Sbjct: 147 EEIGKLLKLSRERIRQIHGIALSKLRQNTIVDSLKFYV 184