BLASTX nr result

ID: Cnidium21_contig00037540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037540
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...    66   3e-09
gb|EEE50503.1| hypothetical protein OsJ_30589 [Oryza sativa Japo...    66   3e-09
gb|EEC66507.1| hypothetical protein OsI_32621 [Oryza sativa Indi...    66   3e-09
gb|AAK52526.1|AC079128_9 Unknown protein [Oryza sativa Japonica ...    66   3e-09

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = +3

Query: 177 MKKKMRIGNDILEGQDRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNLPFLKL 356
           M+ + R  + +   +DRIS L + L+H+ILS+VD    VQT VLSKRW  VWK+ P+L  
Sbjct: 1   MESRTRKRSSLNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDF 60

Query: 357 DG-------HGNYFNRKEARFSKFVDNVFTNRNH 437
           +        + +Y+  +   F+ F++ V   RN+
Sbjct: 61  NFETFSSLINSDYYEDEMVNFTDFINQVLVRRNN 94


>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 180 KKKMRIGNDILEGQDRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNLPFLKLD 359
           K+K+   ++  E QDR+S LSD ++  ILS ++T+ AVQT +LS RWK +WK LP L L 
Sbjct: 3   KRKLEHNSNNSENQDRLSDLSDCVLLHILSSLNTKHAVQTCILSTRWKNLWKRLPSLALR 62

Query: 360 GHGNYFNRKEARFSKFVDNVFTNRN 434
              ++ N K  RF+KFV  V + RN
Sbjct: 63  S-SDFRNVK--RFAKFVSRVLSLRN 84


>gb|EEE50503.1| hypothetical protein OsJ_30589 [Oryza sativa Japonica Group]
          Length = 424

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
 Frame = +3

Query: 222 DRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNL-----PFLKLDGHGNYFNRK 386
           DR+S LS+DLI +I+S +D+R AVQTS+LS+RW+ +W +L      F + DG  + +   
Sbjct: 10  DRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDGETDSWEGD 69

Query: 387 EARFSKFVDNVFTNRN 434
           +ARF KFV+N+   R+
Sbjct: 70  QARFRKFVNNLLLRRD 85


>gb|EEC66507.1| hypothetical protein OsI_32621 [Oryza sativa Indica Group]
          Length = 309

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
 Frame = +3

Query: 222 DRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNL-----PFLKLDGHGNYFNRK 386
           DR+S LS+DLI +I+S +D+R AVQTS+LS+RW+ +W +L      F + DG  + +   
Sbjct: 10  DRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDGETDSWEGD 69

Query: 387 EARFSKFVDNVFTNRN 434
           +ARF KFV+N+   R+
Sbjct: 70  QARFRKFVNNLLLRRD 85


>gb|AAK52526.1|AC079128_9 Unknown protein [Oryza sativa Japonica Group]
           gi|110288565|gb|ABB46665.2| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 1078

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
 Frame = +3

Query: 222 DRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNL-----PFLKLDGHGNYFNRK 386
           DR+S LS+DLI +I+S +D+R AVQTS+LS+RW+ +W +L      F + DG  + +   
Sbjct: 49  DRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDGETDSWEGD 108

Query: 387 EARFSKFVDNVFTNRN 434
           +ARF KFV+N+   R+
Sbjct: 109 QARFRKFVNNLLLRRD 124


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