BLASTX nr result
ID: Cnidium21_contig00037540
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00037540 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_003624505.1| F-box family protein [Medicago truncatula] g... 66 3e-09 gb|EEE50503.1| hypothetical protein OsJ_30589 [Oryza sativa Japo... 66 3e-09 gb|EEC66507.1| hypothetical protein OsI_32621 [Oryza sativa Indi... 66 3e-09 gb|AAK52526.1|AC079128_9 Unknown protein [Oryza sativa Japonica ... 66 3e-09 >ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1| predicted protein [Populus trichocarpa] Length = 378 Score = 66.2 bits (160), Expect = 3e-09 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%) Frame = +3 Query: 177 MKKKMRIGNDILEGQDRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNLPFLKL 356 M+ + R + + +DRIS L + L+H+ILS+VD VQT VLSKRW VWK+ P+L Sbjct: 1 MESRTRKRSSLNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDF 60 Query: 357 DG-------HGNYFNRKEARFSKFVDNVFTNRNH 437 + + +Y+ + F+ F++ V RN+ Sbjct: 61 NFETFSSLINSDYYEDEMVNFTDFINQVLVRRNN 94 >ref|XP_003624505.1| F-box family protein [Medicago truncatula] gi|355499520|gb|AES80723.1| F-box family protein [Medicago truncatula] Length = 357 Score = 65.9 bits (159), Expect = 3e-09 Identities = 39/85 (45%), Positives = 55/85 (64%) Frame = +3 Query: 180 KKKMRIGNDILEGQDRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNLPFLKLD 359 K+K+ ++ E QDR+S LSD ++ ILS ++T+ AVQT +LS RWK +WK LP L L Sbjct: 3 KRKLEHNSNNSENQDRLSDLSDCVLLHILSSLNTKHAVQTCILSTRWKNLWKRLPSLALR 62 Query: 360 GHGNYFNRKEARFSKFVDNVFTNRN 434 ++ N K RF+KFV V + RN Sbjct: 63 S-SDFRNVK--RFAKFVSRVLSLRN 84 >gb|EEE50503.1| hypothetical protein OsJ_30589 [Oryza sativa Japonica Group] Length = 424 Score = 65.9 bits (159), Expect = 3e-09 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 5/76 (6%) Frame = +3 Query: 222 DRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNL-----PFLKLDGHGNYFNRK 386 DR+S LS+DLI +I+S +D+R AVQTS+LS+RW+ +W +L F + DG + + Sbjct: 10 DRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDGETDSWEGD 69 Query: 387 EARFSKFVDNVFTNRN 434 +ARF KFV+N+ R+ Sbjct: 70 QARFRKFVNNLLLRRD 85 >gb|EEC66507.1| hypothetical protein OsI_32621 [Oryza sativa Indica Group] Length = 309 Score = 65.9 bits (159), Expect = 3e-09 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 5/76 (6%) Frame = +3 Query: 222 DRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNL-----PFLKLDGHGNYFNRK 386 DR+S LS+DLI +I+S +D+R AVQTS+LS+RW+ +W +L F + DG + + Sbjct: 10 DRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDGETDSWEGD 69 Query: 387 EARFSKFVDNVFTNRN 434 +ARF KFV+N+ R+ Sbjct: 70 QARFRKFVNNLLLRRD 85 >gb|AAK52526.1|AC079128_9 Unknown protein [Oryza sativa Japonica Group] gi|110288565|gb|ABB46665.2| F-box domain containing protein, expressed [Oryza sativa Japonica Group] Length = 1078 Score = 65.9 bits (159), Expect = 3e-09 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 5/76 (6%) Frame = +3 Query: 222 DRISCLSDDLIHKILSYVDTRMAVQTSVLSKRWKLVWKNL-----PFLKLDGHGNYFNRK 386 DR+S LS+DLI +I+S +D+R AVQTS+LS+RW+ +W +L F + DG + + Sbjct: 49 DRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDGETDSWEGD 108 Query: 387 EARFSKFVDNVFTNRN 434 +ARF KFV+N+ R+ Sbjct: 109 QARFRKFVNNLLLRRD 124