BLASTX nr result

ID: Cnidium21_contig00037530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037530
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22119.1| unknown [Picea sitchensis] gi|116791336|gb|ABK259...    60   1e-07
ref|NP_180826.2| vesicle-associated membrane protein 725 [Arabid...    60   2e-07
gb|AAC04496.1| putative synaptobrevin [Arabidopsis thaliana]           58   9e-07
ref|XP_002879406.1| hypothetical protein ARALYDRAFT_482195 [Arab...    57   1e-06
gb|AFK40729.1| unknown [Lotus japonicus]                               57   2e-06

>gb|ABK22119.1| unknown [Picea sitchensis] gi|116791336|gb|ABK25940.1| unknown
           [Picea sitchensis]
          Length = 222

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MKEQFIV*SFIAKGRQILFEYGEAPEKFERLVVPSCDEKFTCS---FTKSGDQYGYYYLV 85
           M +Q ++ SF+A+G  +L EY E    F  +    C +K   S   FT + D + + YLV
Sbjct: 1   MGQQSLIYSFVARGTVVLAEYTEFKGNFTTIAA-QCLQKLPASNNKFTYNCDNHTFNYLV 59

Query: 84  DKSLAYCVVANQSVGLYLLMGFLERIEK 1
           +   AYCVVA++SVG  + M FLER+++
Sbjct: 60  EDGFAYCVVADESVGRQVPMAFLERVKE 87


>ref|NP_180826.2| vesicle-associated membrane protein 725 [Arabidopsis thaliana]
           gi|71164795|sp|O48850.2|VA725_ARATH RecName:
           Full=Vesicle-associated membrane protein 725;
           Short=AtVAMP725 gi|26451676|dbj|BAC42934.1| putative
           synaptobrevin [Arabidopsis thaliana]
           gi|29893540|gb|AAP06822.1| putative synaptobrevin
           protein [Arabidopsis thaliana]
           gi|330253620|gb|AEC08714.1| vesicle-associated membrane
           protein 725 [Arabidopsis thaliana]
          Length = 285

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
 Frame = -2

Query: 264 SREMKEQFIV*SFIAKGRQILFEYGEAPEKFERLVVPSCDEKFTCS---FTKSGDQYGYY 94
           +R M +Q ++ SF+A+G  IL EY E    F   V   C +K   S   FT + D + + 
Sbjct: 63  TRTMGQQNLIYSFVARGTVILVEYTEFKGNFTA-VAAQCLQKLPSSNNKFTYNCDGHTFN 121

Query: 93  YLVDKSLAYCVVANQSVGLYLLMGFLERIEK 1
           YLV+    YCVVA +SVG  + M FLER+++
Sbjct: 122 YLVENGFTYCVVAVESVGRQIPMAFLERVKE 152


>gb|AAC04496.1| putative synaptobrevin [Arabidopsis thaliana]
          Length = 220

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MKEQFIV*SFIAKGRQILFEYGEAPEKFERLVVPSCDEKFTCS---FTKSGDQYGYYYLV 85
           M +Q ++ SF+A+G  IL EY E    F   V   C +K   S   FT + D + + YLV
Sbjct: 1   MGQQNLIYSFVARGTVILVEYTEFKGNFTA-VAAQCLQKLPSSNNKFTYNCDGHTFNYLV 59

Query: 84  DKSLAYCVVANQSVGLYLLMGFLERIEK 1
           +    YCVVA +SVG  + M FLER+++
Sbjct: 60  ENGFTYCVVAVESVGRQIPMAFLERVKE 87


>ref|XP_002879406.1| hypothetical protein ARALYDRAFT_482195 [Arabidopsis lyrata subsp.
           lyrata] gi|297325245|gb|EFH55665.1| hypothetical protein
           ARALYDRAFT_482195 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MKEQFIV*SFIAKGRQILFEYGEAPEKFERLVVPSCDEKFTCS---FTKSGDQYGYYYLV 85
           M +Q ++ SF+A+G  IL EY E    F   V   C +K   S   FT + D + + YLV
Sbjct: 1   MGQQNLIYSFVARGTVILAEYTEFKGNFTS-VAAQCLQKLPSSNNKFTYNCDGHTFNYLV 59

Query: 84  DKSLAYCVVANQSVGLYLLMGFLERIEK 1
           +    YCVVA +SVG  + M FLER+++
Sbjct: 60  ENGFTYCVVAVESVGRQIPMAFLERVKE 87


>gb|AFK40729.1| unknown [Lotus japonicus]
          Length = 219

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MKEQFIV*SFIAKGRQILFEYGEAPEKFERLVVPSCDEKFTCS---FTKSGDQYGYYYLV 85
           M +Q ++ SF+A+G  IL EY +    F  + +  C +K   S   FT + D + + YLV
Sbjct: 1   MGQQSLIYSFVARGTLILAEYTDFNGNFTSIAL-QCLQKLPASNKKFTYNCDGHTFSYLV 59

Query: 84  DKSLAYCVVANQSVGLYLLMGFLERIEK 1
           D    YCVVA +S G  + M FLERI++
Sbjct: 60  DNGFTYCVVAVESFGQQIPMAFLERIKE 87


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