BLASTX nr result

ID: Cnidium21_contig00037512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037512
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164657.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   108   3e-22
ref|XP_004146403.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   108   3e-22
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   107   8e-22
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   107   8e-22
gb|ABR17973.1| unknown [Picea sitchensis]                             104   9e-21

>ref|XP_004164657.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 745

 Score =  108 bits (271), Expect = 3e-22
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = -2

Query: 188 KNNTGVLVGECWDICMDCRQWGIHYPHVSGIAGQAKDGAQSVVLFGGYEDGEDHGEWFLY 9
           + N GVLVGECW+  ++CRQWG H+PH++GIAGQ+ +GAQSVVL GGY+D EDHGEWFLY
Sbjct: 270 ERNQGVLVGECWEDRLECRQWGAHFPHIAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLY 329

Query: 8   TG 3
           TG
Sbjct: 330 TG 331


>ref|XP_004146403.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 608

 Score =  108 bits (271), Expect = 3e-22
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = -2

Query: 188 KNNTGVLVGECWDICMDCRQWGIHYPHVSGIAGQAKDGAQSVVLFGGYEDGEDHGEWFLY 9
           + N GVLVGECW+  ++CRQWG H+PH++GIAGQ+ +GAQSVVL GGY+D EDHGEWFLY
Sbjct: 270 ERNQGVLVGECWEDRLECRQWGAHFPHIAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLY 329

Query: 8   TG 3
           TG
Sbjct: 330 TG 331


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score =  107 bits (268), Expect = 8e-22
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -2

Query: 188 KNNTGVLVGECWDICMDCRQWGIHYPHVSGIAGQAKDGAQSVVLFGGYEDGEDHGEWFLY 9
           + N GVLVGECW+  ++CRQWG H+PHV+GIAGQ+  GAQSVVL GGY+D EDHGEWFLY
Sbjct: 291 ERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSSIGAQSVVLSGGYQDDEDHGEWFLY 350

Query: 8   TG 3
           TG
Sbjct: 351 TG 352


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score =  107 bits (268), Expect = 8e-22
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -2

Query: 188 KNNTGVLVGECWDICMDCRQWGIHYPHVSGIAGQAKDGAQSVVLFGGYEDGEDHGEWFLY 9
           + N GVLVGECW+  ++CRQWG H+PHV+GIAGQ+  GAQSVVL GGY+D EDHGEWFLY
Sbjct: 291 ERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSSIGAQSVVLSGGYQDDEDHGEWFLY 350

Query: 8   TG 3
           TG
Sbjct: 351 TG 352


>gb|ABR17973.1| unknown [Picea sitchensis]
          Length = 830

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = -2

Query: 188 KNNTGVLVGECWDICMDCRQWGIHYPHVSGIAGQAKDGAQSVVLFGGYEDGEDHGEWFLY 9
           + N GVLVGECW   M+CRQWG H PHV+GI+GQ+  GAQSV L GGYED EDHGEWFLY
Sbjct: 273 ERNQGVLVGECWGDRMECRQWGAHLPHVAGISGQSDYGAQSVALSGGYEDDEDHGEWFLY 332

Query: 8   TG 3
           TG
Sbjct: 333 TG 334


Top