BLASTX nr result

ID: Cnidium21_contig00037496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037496
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...   110   1e-22
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   108   4e-22
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   106   2e-21
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]   103   2e-20
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              100   2e-19

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score =  110 bits (276), Expect = 1e-22
 Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
 Frame = +2

Query: 32   NGRIWVGWDPGKWDVYTLSKTSQHITCSVTFLEKQISFCITFVYALNKPHQRLPLWSDLG 211
            NGRIWV W+P   DV  ++ ++Q I C V  L     F    VYA N   QR  LW+ + 
Sbjct: 583  NGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWNFIA 642

Query: 212  SLSTTITGPWCVSGDFNCVLSLEEISGGREHWTPDMQVFKECITNAGLGHINTIGPLFTW 391
              S   +    + GDFN VL +++   G      ++Q F +C+ +  L  + TIG  +TW
Sbjct: 643  HTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDYYTW 702

Query: 392  SNHRNV--VIHKRLDRILGNKDWFATFTEAQAMVKLKGIMDHCPI 520
             N++     I+ ++DR + N  W   FT A   V  KG+ DHCPI
Sbjct: 703  CNNQTSGDRIYSKIDRFIANTSWLQKFTNAVGEVLPKGVSDHCPI 747


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  108 bits (271), Expect = 4e-22
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
 Frame = +2

Query: 26  HFNGRIWVGWDPGKWDVYTLSKTSQHITCSVTFLEKQISFCITFVYALNKPHQRLPLWSD 205
           H NGR+W+ WD  K DV  +  +SQ++   V  L+ +  F +T VYALN+  +R  LW D
Sbjct: 404 HDNGRLWIEWDNSKIDVRHVKCSSQYVHVGVYNLQGEFKFWLTAVYALNQLDRRKVLWKD 463

Query: 206 LGSLSTTITGPWCVSGDFNCVLSLEEISGGREHWTPDMQVFKECITNAGLGHINTIGPLF 385
           L ++     GPWCV GDFN V   ++  GG+     +       +    L  ++T G  +
Sbjct: 464 LEAIHKHQQGPWCVIGDFNNVTKAQDRIGGKAVTESEYIDLLNMMETTCLAEMDTTGEFY 523

Query: 386 TWSNHRNV-VIHKRLDRILGNKDWFATFTEAQAMVKLKGIMDH 511
           TW+N + +  I+ R+DR+LGN +WF    +    V    + DH
Sbjct: 524 TWTNKQVIGTIYSRIDRVLGNLNWFQDNLDTVLTVLPTSVSDH 566


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  106 bits (265), Expect = 2e-21
 Identities = 63/173 (36%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
 Frame = +2

Query: 35  GRIWVGWDPGKWDVYTLSKTSQHITCSVTFLEKQISFCITFVYALNKPHQRLPLWSDLGS 214
           GRIWV WDP   +V  LSK+ Q I+C+V        F +TFVYA+N  + R  LWS+L  
Sbjct: 68  GRIWVVWDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELEL 126

Query: 215 LS---TTITGPWCVSGDFNCVLSLEEISGGREHWTPDMQVFKECITNAGLGHINTIGPLF 385
           L+   TT   PW + GDFN  L   + S G    T  M+ F+EC+  + +  +   G  +
Sbjct: 127 LAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHY 186

Query: 386 T-WSNHRNVVIHKRLDRILGNKDWFATFTEAQAMVKLKGIMDHCPILLTVPMQ 541
           T W+N  N  I K++DRIL N  W      +          DHCP  + +  Q
Sbjct: 187 TWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQ 239


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score =  103 bits (256), Expect = 2e-20
 Identities = 62/164 (37%), Positives = 83/164 (50%)
 Frame = +2

Query: 35   GRIWVGWDPGKWDVYTLSKTSQHITCSVTFLEKQISFCITFVYALNKPHQRLPLWSDLGS 214
            G I V WD    ++  L K    I+C     E   ++  T VY  NK  +R  LW++LG+
Sbjct: 698  GGIVVLWDNRVLEMIELEKGECSISCLFKNCEDGFTWTFTGVYGPNKRRERENLWNELGA 757

Query: 215  LSTTITGPWCVSGDFNCVLSLEEISGGREHWTPDMQVFKECITNAGLGHINTIGPLFTWS 394
            +     GPWCV+GDFN +LS EE S G   +  DM+ F E I    L  +   G  FTWS
Sbjct: 758  IHGLWNGPWCVAGDFNAILSPEERSRGGS-FNSDMRRFAEVIEELQLKDLTLFGGPFTWS 816

Query: 395  NHRNVVIHKRLDRILGNKDWFATFTEAQAMVKLKGIMDHCPILL 526
               N     RLDR L N+ W   F+ ++  V  + + DH PILL
Sbjct: 817  GGVNNQTMSRLDRFLVNEGWDCRFSHSRQSVLPRPVSDHFPILL 860


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  100 bits (248), Expect = 2e-19
 Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
 Frame = +2

Query: 11  CCS*CHFNGRIWVGWDPGKWDVYTLSKTSQHITCSVTFLEKQISFCITFVYALNKPHQRL 190
           CCS     GRIW+ WDP    V    +T Q + CS+       SF + FVY  N    R 
Sbjct: 105 CCSEL---GRIWIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRR 160

Query: 191 PLWSDLGSLSTTI---TGPWCVSGDFNCVLSLEEISGGREHWTPD--------MQVFKEC 337
            LW D+  LS T      PW + GDFN      +I+   EH++ +        M+  + C
Sbjct: 161 SLWEDILVLSRTSPLSVTPWLLLGDFN------QIAAASEHYSINQSLLNLRGMEDLQCC 214

Query: 338 ITNAGLGHINTIGPLFTWSNHR--NVVIHKRLDRILGNKDWFATFTEAQAMVKLKGIMDH 511
           + ++ L  + + G  FTWSNH+  N ++ K LDR L N +WFA F  A A+    G  DH
Sbjct: 215 LRDSQLSDLPSRGVFFTWSNHQQDNPILRK-LDRALANGEWFAVFPSALAVFDPPGDSDH 273

Query: 512 CPILLTVPMQ 541
            P ++ +  Q
Sbjct: 274 APCIILIDNQ 283


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