BLASTX nr result

ID: Cnidium21_contig00037469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037469
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...   157   9e-37
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...   143   2e-32
ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_003537562.1| PREDICTED: putative uncharacterized protein ...   139   2e-31
ref|XP_003552808.1| PREDICTED: putative uncharacterized protein ...   138   4e-31

>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score =  157 bits (397), Expect = 9e-37
 Identities = 73/117 (62%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3    HSLKEAVPGAELTLSTRHHTIYIQGRKQEKQMVEEIIHQIAQTSPQL--KVENEVSCPIC 176
            H LKE VPGAE TL+TR H IYI G K+ KQ V++I+++IAQ S     + ++E +CPIC
Sbjct: 1478 HGLKEKVPGAEFTLNTRRHIIYIHGNKELKQKVQDIVYEIAQKSGSSDERPDDEAACPIC 1537

Query: 177  LCEVEDGFRLEACGHEFCRLCLVEQCESAIKSQDSFPMYCSYQGCSALLLIADLKSL 347
            LCEVEDG+ LEAC H+FCRLCLVEQCESAIKSQDSFP+ C+++GC   + + DLKSL
Sbjct: 1538 LCEVEDGYCLEACAHKFCRLCLVEQCESAIKSQDSFPVCCTHEGCRTPIWLTDLKSL 1594


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
            [Medicago truncatula] gi|355490965|gb|AES72168.1|
            Pre-mRNA splicing factor ATP-dependent RNA helicase-like
            protein [Medicago truncatula]
          Length = 1718

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/117 (57%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3    HSLKEAVPGAELTLSTRHHTIYIQGRKQEKQMVEEIIHQIAQTSPQL--KVENEVSCPIC 176
            H LKE VPGA+L L+TR   I++ G K+ K  VEEI  +IA++S  L  +++   SCPIC
Sbjct: 1454 HGLKEKVPGADLELNTRQQIIFLHGNKELKPRVEEITLEIARSSHHLVERLDTGPSCPIC 1513

Query: 177  LCEVEDGFRLEACGHEFCRLCLVEQCESAIKSQDSFPMYCSYQGCSALLLIADLKSL 347
            LCEVEDG++LE CGH FCRLCLVEQCESAIK+Q SFP+ C++QGC   +L+ D ++L
Sbjct: 1514 LCEVEDGYKLEGCGHLFCRLCLVEQCESAIKNQGSFPICCAHQGCGDPILLTDFRTL 1570


>ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|222856516|gb|EEE94063.1|
            predicted protein [Populus trichocarpa]
          Length = 1743

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/117 (57%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3    HSLKEAVPGAELTLSTRHHTIYIQGRKQEKQMVEEIIHQIAQTSPQL--KVENEVSCPIC 176
            H LKE VPGA+LTLSTRHH I + G K+ KQ VEEII ++AQ       +++   +CP+C
Sbjct: 1478 HGLKEKVPGADLTLSTRHHVISVHGDKELKQNVEEIIFEMAQMGYDSAERLDGGDACPVC 1537

Query: 177  LCEVEDGFRLEACGHEFCRLCLVEQCESAIKSQDSFPMYCSYQGCSALLLIADLKSL 347
            LCEVED +RLE+CGH FCR+CLVEQ ESA+K+ DSFP+ C++  C A +L+ DL+SL
Sbjct: 1538 LCEVEDAYRLESCGHLFCRMCLVEQLESALKNLDSFPICCAHGSCRAPILLTDLRSL 1594


>ref|XP_003537562.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1736

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/115 (58%), Positives = 86/115 (74%), Gaps = 2/115 (1%)
 Frame = +3

Query: 9    LKEAVPGAELTLSTRHHTIYIQGRKQEKQMVEEIIHQIAQTSPQL--KVENEVSCPICLC 182
            LKE VPG +LTL+TR H + + G K+ K  VEEII +IA++S  L  + EN  SCPICLC
Sbjct: 1473 LKERVPGVDLTLNTRRHIVILHGSKELKPRVEEIIFEIARSSHHLVERFENGPSCPICLC 1532

Query: 183  EVEDGFRLEACGHEFCRLCLVEQCESAIKSQDSFPMYCSYQGCSALLLIADLKSL 347
            EVEDG+RLE CGH FCRLCLVEQ ESAI +Q +FP+ C+++ C   +L+ DL+SL
Sbjct: 1533 EVEDGYRLEGCGHLFCRLCLVEQFESAINNQGTFPVCCTHRDCGDPILLTDLRSL 1587


>ref|XP_003552808.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1729

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/117 (56%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3    HSLKEAVPGAELTLSTRHHTIYIQGRKQEKQMVEEIIHQIAQTSPQL--KVENEVSCPIC 176
            H LKE VPG +LTL+ R H I + G K+ K  VEEI+ +IA++S  L  +  N  SCPIC
Sbjct: 1465 HGLKERVPGVDLTLNIRRHIIILHGSKELKPRVEEIVFEIARSSHHLVERFGNGPSCPIC 1524

Query: 177  LCEVEDGFRLEACGHEFCRLCLVEQCESAIKSQDSFPMYCSYQGCSALLLIADLKSL 347
            LCEVEDG+RLE CGH FCR+CLVEQ ESAIK+Q +FP+ C+++ C   +L+ DL+SL
Sbjct: 1525 LCEVEDGYRLEGCGHLFCRMCLVEQFESAIKNQGTFPVCCTHRDCGDPILLTDLRSL 1581


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