BLASTX nr result

ID: Cnidium21_contig00037390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037390
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...    57   2e-06
ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551...    57   2e-06
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
           Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
 Frame = -2

Query: 307 SEHGQFNN--MVQSSSMMEH-----NTMRSALRAKQEIQHQAEKSLDSTNISNSLSRTPH 149
           ++ G+  N  +V ++S ME+       M++ LRA  E  H   K  DSTNI N   R P+
Sbjct: 245 AKSGEMTNFSVVPNNSQMENISTFSGNMKTMLRANPEGHHLLAKQTDSTNIGNPTGRAPN 304

Query: 148 SRHPEEIEVSSAHNALSRQ 92
           S++PE++EVSSAH A  +Q
Sbjct: 305 SKYPEDLEVSSAHIAPGKQ 323


>ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1|
           Helicase swr1 [Medicago truncatula]
          Length = 3312

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
 Frame = -2

Query: 307 SEHGQFNN--MVQSSSMMEH-----NTMRSALRAKQEIQHQAEKSLDSTNISNSLSRTPH 149
           ++ G+  N  +V ++S ME+       M++ LRA  E  H   K  DSTNI N   R P+
Sbjct: 245 AKSGEMTNFSVVPNNSQMENISTFSGNMKTMLRANPEGHHLLAKQTDSTNIGNPTGRAPN 304

Query: 148 SRHPEEIEVSSAHNALSRQ 92
           S++PE++EVSSAH A  +Q
Sbjct: 305 SKYPEDLEVSSAHIAPGKQ 323


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
           gi|223543945|gb|EEF45471.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 3502

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -2

Query: 130 IEVSSAHNALSRQGVSLPVAHDVLNTRGTWNQTKTGTPFEKSQ 2
           ++VSSAH    +QGVSLP AH+ L++R  WNQ KTG P E+SQ
Sbjct: 242 LDVSSAHIPAGQQGVSLPSAHENLSSRTAWNQNKTGLPLERSQ 284


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