BLASTX nr result

ID: Cnidium21_contig00037378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037378
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CBI30808.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39

>ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|222875393|gb|EEF12524.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  174 bits (440), Expect = 9e-42
 Identities = 78/106 (73%), Positives = 95/106 (89%)
 Frame = -1

Query: 320 CSAAYILLSNLYAFAGRWSDVARVRGNMKRMGIVKQTGSSWITLKGLKHTFLSGDRSHPL 141
           CS+AY+LLSN+YA AGRW+DV+R+R  MK+ G+VKQ GSSW+ L+G KH FLS DRSHPL
Sbjct: 505 CSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPL 564

Query: 140 CEKIYQKLEWLGEKLKEFGYVPDQRFALHDVEEEQKEAMLSYHSER 3
            E+IY+KL+WLG+KLKEFGYVPDQ+FALHDVE+EQKE MLS+HSER
Sbjct: 565 SERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSER 610


>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/106 (75%), Positives = 91/106 (85%)
 Frame = -1

Query: 320 CSAAYILLSNLYAFAGRWSDVARVRGNMKRMGIVKQTGSSWITLKGLKHTFLSGDRSHPL 141
           CS+AY+LLSNLYA A RWSDV+R+R  MK+ GI KQ G SWIT+KG ++ FLSGDRSHP 
Sbjct: 506 CSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPS 565

Query: 140 CEKIYQKLEWLGEKLKEFGYVPDQRFALHDVEEEQKEAMLSYHSER 3
            ++IYQKLEWLG KLKE GYVPDQRFALHDVE+EQKE MLSYHSER
Sbjct: 566 SDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSER 611


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/106 (76%), Positives = 90/106 (84%)
 Frame = -1

Query: 320 CSAAYILLSNLYAFAGRWSDVARVRGNMKRMGIVKQTGSSWITLKGLKHTFLSGDRSHPL 141
           CSAAY+LLSNLYA + RW++VA +R  MK  G+VK+ GSSW+TLKG KH FLS DRSHPL
Sbjct: 551 CSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPL 610

Query: 140 CEKIYQKLEWLGEKLKEFGYVPDQRFALHDVEEEQKEAMLSYHSER 3
            EKIYQKLEWLG KLKE GYVPDQ+FALHDVE EQKE MLSYHSER
Sbjct: 611 AEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSER 656


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/106 (75%), Positives = 91/106 (85%)
 Frame = -1

Query: 320 CSAAYILLSNLYAFAGRWSDVARVRGNMKRMGIVKQTGSSWITLKGLKHTFLSGDRSHPL 141
           CS+AY+LLSNLYA A RWSDV+R+R  MK+ GI KQ G SWIT+KG ++ FLSGDRSHP 
Sbjct: 490 CSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPS 549

Query: 140 CEKIYQKLEWLGEKLKEFGYVPDQRFALHDVEEEQKEAMLSYHSER 3
            ++IYQKLEWLG KLKE GYVPDQRFALHDVE+EQKE MLSYHSER
Sbjct: 550 SDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSER 595


>ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
           gi|449533166|ref|XP_004173548.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/106 (71%), Positives = 89/106 (83%)
 Frame = -1

Query: 320 CSAAYILLSNLYAFAGRWSDVARVRGNMKRMGIVKQTGSSWITLKGLKHTFLSGDRSHPL 141
           CSAAY LLSNLYA  G+W++V+++R  MK  GI+KQ GSSWIT+KG+KH F+SGD+SHPL
Sbjct: 542 CSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPL 601

Query: 140 CEKIYQKLEWLGEKLKEFGYVPDQRFALHDVEEEQKEAMLSYHSER 3
             KIYQKLEWLG KLKE GYVPD +F+ HDVE EQKE MLSYHSER
Sbjct: 602 SRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSER 647


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