BLASTX nr result

ID: Cnidium21_contig00037359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037359
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40164.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    67   2e-09
ref|XP_004137956.1| PREDICTED: uncharacterized protein LOC101210...    65   4e-09
ref|NP_189030.1| F-box/kelch-repeat protein [Arabidopsis thalian...    64   1e-08
dbj|BAJ24867.1| S-locus linked F-box protein type-4 [Petunia x h...    64   2e-08

>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
 Frame = -2

Query: 486 LYLWNPCVQTHRTLVSTCFKKVIGDFLRCFCLVGFGF--NEASNDYRVVRI-FYARDKIS 316
           L+LWNP ++  +TL     K  I +F     +VG GF  +   NDY+VVRI ++ R+K S
Sbjct: 136 LFLWNPAIREFQTLP----KYHINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFMRNKTS 191

Query: 315 PPKVEIYSLRKHTWRRIKDPLVPR-QGSADGVYANGSFYWLETTFPTTLDDVRYNNSEDL 139
             + ++YSLR  +WR++   +      +    + NG+ +WL             +N+++L
Sbjct: 192 --EADVYSLRTGSWRKVDANICCYIHSNVSRTFINGALHWLAG------KKNEMDNTDNL 243

Query: 138 WILSFDFEKEVFGELKVPGKVALCIGTTAKFR--LMEFEGSLALCVFD 1
            ILSFD  K+VF E+ +P       G     R  L +++GSL++  +D
Sbjct: 244 -ILSFDMAKDVFKEIMLPD-----FGYDELIRKCLADYKGSLSVLFYD 285


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 9/109 (8%)
 Frame = -2

Query: 480 LWNPCVQTHRTL--VSTCFKKVIGDFLRCFCLV---GFGFNEASNDYRVVRI--FYARDK 322
           LWNP ++ HR +  +    K+  G    C C V   GFG++ +++DY++VRI  F   D+
Sbjct: 110 LWNPSIRAHRVVPYLPVELKRYFG---MCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDR 166

Query: 321 IS-PPKVEIYSLRKHTWRRIKD-PLVPRQGSADGVYANGSFYWLETTFP 181
            S   +V+++SLRK++WRRI D P        +G+YANG+ +WL +  P
Sbjct: 167 KSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQDP 215


>ref|XP_004137956.1| PREDICTED: uncharacterized protein LOC101210504 [Cucumis sativus]
          Length = 542

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
 Frame = -2

Query: 390 VGFGFNEASNDYRVVRIF-YARDKIS-PPKVEIYSLRKHTWRRIKDPLVPR---QGSADG 226
           VGFG++    D++VVR+  + RD +  P KVEIY LRK  WR IK  +V     Q S D 
Sbjct: 262 VGFGYDVQCGDFKVVRVMSHWRDIVCYPSKVEIYDLRKDRWREIKTTVVADVFWQPSFD- 320

Query: 225 VYANGSFYWLETTFPTTLDDVRYNNSEDLWILSFDFEKEVFGELKVPGKVALCIGTTAKF 46
            Y  G+FYW   +            +E   +L+FD  KEVFG++ +P       G     
Sbjct: 321 TYHEGTFYWFGLS----------GVNEKQVMLTFDMSKEVFGKISLPESFHFSKGNYRS- 369

Query: 45  RLMEFEGSLAL 13
            LM   GSL L
Sbjct: 370 -LMVLNGSLCL 379


>ref|NP_189030.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75273451|sp|Q9LIR8.1|FBK67_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g23880
           gi|9294656|dbj|BAB03005.1| unnamed protein product
           [Arabidopsis thaliana] gi|26449693|dbj|BAC41970.1|
           unknown protein [Arabidopsis thaliana]
           gi|30725382|gb|AAP37713.1| At3g23880 [Arabidopsis
           thaliana] gi|332643304|gb|AEE76825.1| F-box/kelch-repeat
           protein [Arabidopsis thaliana]
          Length = 364

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
 Frame = -2

Query: 486 LYLWNPCVQTHRTLVSTCFKKVIGDFLRCFCLVGFGFNEASNDYRVVRIFYARDKISPPK 307
           LYLWNP ++  + L S+  +    +   C    GFG++E+ +DY+VV +   R ++   +
Sbjct: 130 LYLWNPTIKLQQRLSSSDLETSDDE---CVVTYGFGYDESEDDYKVVALLQQRHQVK-IE 185

Query: 306 VEIYSLRKHTWR---RIKDPLVPRQGSADGVYANGSFYWLETTFPTTLDDVRYNNSEDLW 136
            +IYS R+  WR        +V    S  G+Y NG+  W  T           ++S    
Sbjct: 186 TKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAAT-----------SSSSSWT 234

Query: 135 ILSFDFEKEVFGELKVPGKVALCIG 61
           I+S+D  ++ F EL  PG V  C G
Sbjct: 235 IISYDMSRDEFKEL--PGPV--CCG 255


>dbj|BAJ24867.1| S-locus linked F-box protein type-4 [Petunia x hybrida]
          Length = 403

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
 Frame = -2

Query: 480 LWNPCVQTHRTLVSTCFKKVIGDFLRCFCLVGFGFNEASNDYRVVRI--FYARDKISPP- 310
           L+NP  + +R L S+ F    G + R     GFGF+   NDY+V+RI   Y  D+   P 
Sbjct: 140 LFNPSTRKYRLLPSSPFGTPKG-YYRSIDSGGFGFDSVVNDYKVLRISDVYTEDRYGYPE 198

Query: 309 ----KVEIYSLRKHTWRRIK--DPLVPRQ-GSADGVYANGSFYWLETTFPTTLDDVRYNN 151
               KVE+Y +    WR +   D  +PR       +Y NG+++W+ T           N+
Sbjct: 199 EGERKVEVYEVGIDIWRELDHVDKDLPRLFWLTSSMYYNGAYHWITT----------LNH 248

Query: 150 SEDLWILSFDFEKEVFGELKVPGKVALCIGTTAKFRLME 34
            + L IL FD   E+F  +  P       GT     L++
Sbjct: 249 EDKLIILCFDMSTEIFRNINTPDTSQFSSGTCHSLVLLD 287


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