BLASTX nr result

ID: Cnidium21_contig00037352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037352
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
 Frame = +3

Query: 3   IFTRLPAKSLGQCKTVLKSWNSLISNPYFIKIHIPKTTPTNTLILISS----------VH 152
           I +RLP +++ QCK+V KSW  L+S PYF ++H  K  P++ L    S          +H
Sbjct: 32  ILSRLPVEAMTQCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLFCHCSGNKTKLYCCHIH 91

Query: 153 FNNNSNHDMFAT------KLGFNCAWDWVLGSFDGLILVQANRVVCSGLFLLNPTTLESK 314
            +  SN +          KL  N     V+GS +GL+ +     +    ++ NP T E  
Sbjct: 92  SSRGSNINNAMVSMPTKFKLPKNTFRGKVVGSSNGLLCLSEIHRMKKKFYICNPITGEYI 151

Query: 315 KFPNMKNFHSWNLFE 359
                K    W++FE
Sbjct: 152 GIAGPKVDQGWHVFE 166


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
 Frame = +3

Query: 3   IFTRLPAKSLGQCKTVLKSWNSLISNPYFIKIHIPKTTPTNTL----------ILISSVH 152
           I T LP KSL + K V K W  LIS+P F+K+H+ +    N +           L SSV 
Sbjct: 12  ILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNINRQRLLVAAEPLYSSVD 71

Query: 153 FNNNSNHDMF----------ATKLGFNCAWDWVLGSFDGLILVQANRVVCSGLFLLNPTT 302
           F   S+ D            A     + A+  + GS DGL+ ++ N      +FL NP+T
Sbjct: 72  FEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVCIR-NGGDVHDMFLWNPST 130

Query: 303 LESKKFP 323
            ESKK P
Sbjct: 131 RESKKLP 137


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