BLASTX nr result

ID: Cnidium21_contig00037306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037306
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333360.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002306986.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002273221.1| PREDICTED: U-box domain-containing protein 4...   146   2e-33
ref|XP_002510699.1| ubiquitin-protein ligase, putative [Ricinus ...   139   2e-31
ref|XP_004144243.1| PREDICTED: U-box domain-containing protein 4...   134   8e-30

>ref|XP_002333360.1| predicted protein [Populus trichocarpa] gi|222836311|gb|EEE74732.1|
           predicted protein [Populus trichocarpa]
          Length = 813

 Score =  150 bits (379), Expect = 1e-34
 Identities = 78/97 (80%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   GDMQSREAALKALNQISSFEASAKVLIDEGVLPPLVKYLFNVGKNQ-PMRLKEVSATILA 179
           G++QSREAALKALNQISS+EASAKVLI+ G+LPPLVK LF VG NQ PMRLKEVSATIL+
Sbjct: 329 GNVQSREAALKALNQISSYEASAKVLIEAGILPPLVKDLFTVGSNQLPMRLKEVSATILS 388

Query: 180 NIVNSGSDFDSIPVGPNHQTLVSEGILHKLLHLISNT 290
           N+VNSG+DFD IPVGP+HQTLVSE I+  LLHLISNT
Sbjct: 389 NVVNSGNDFDLIPVGPDHQTLVSEDIVQNLLHLISNT 425


>ref|XP_002306986.1| predicted protein [Populus trichocarpa] gi|222856435|gb|EEE93982.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  147 bits (372), Expect = 7e-34
 Identities = 77/97 (79%), Positives = 85/97 (87%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   GDMQSREAALKALNQISSFEASAKVLIDEGVLPPLVKYLFNVGKNQ-PMRLKEVSATILA 179
           GDMQSREAALKALNQIS  EASAKVLI+ G+LPPLVK LF VG NQ PMRLKEV+ATILA
Sbjct: 329 GDMQSREAALKALNQISFHEASAKVLIEAGILPPLVKDLFTVGTNQLPMRLKEVAATILA 388

Query: 180 NIVNSGSDFDSIPVGPNHQTLVSEGILHKLLHLISNT 290
           N+VNSG DFD IPVGP+H +LVSE ++H LLHLISNT
Sbjct: 389 NVVNSGDDFDLIPVGPDHHSLVSEDMVHNLLHLISNT 425


>ref|XP_002273221.1| PREDICTED: U-box domain-containing protein 43 [Vitis vinifera]
          Length = 813

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/97 (78%), Positives = 86/97 (88%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   GDMQSREAALKALNQISSFEASAKVLIDEGVLPPLVKYLFNVGKNQ-PMRLKEVSATILA 179
           G++Q REAALKALNQISSF+ASA+VLI+EG+LPPL+K L  VG NQ PMRLKEVSATILA
Sbjct: 329 GNLQLREAALKALNQISSFDASARVLIEEGILPPLIKDLLTVGTNQLPMRLKEVSATILA 388

Query: 180 NIVNSGSDFDSIPVGPNHQTLVSEGILHKLLHLISNT 290
           N+V SG DFDSIPVG +HQTLVSE I+H LLHLISNT
Sbjct: 389 NVVQSGYDFDSIPVGSDHQTLVSEDIVHNLLHLISNT 425


>ref|XP_002510699.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551400|gb|EEF52886.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 813

 Score =  139 bits (350), Expect = 2e-31
 Identities = 73/97 (75%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   GDMQSREAALKALNQISSFEASAKVLIDEGVLPPLVKYLFNVGKNQ-PMRLKEVSATILA 179
           G+ +SREAALKALNQISS+E SAKVLI+ G+LPPLV+ LF VG NQ PMRLKEVSATILA
Sbjct: 329 GNTKSREAALKALNQISSYEPSAKVLIEAGILPPLVEDLFKVGSNQLPMRLKEVSATILA 388

Query: 180 NIVNSGSDFDSIPVGPNHQTLVSEGILHKLLHLISNT 290
           N+VNS  +FDS+ VG +HQTLVSE I+H LLHLISNT
Sbjct: 389 NVVNSDYEFDSVSVGADHQTLVSEDIVHNLLHLISNT 425


>ref|XP_004144243.1| PREDICTED: U-box domain-containing protein 44-like [Cucumis
           sativus] gi|449489349|ref|XP_004158286.1| PREDICTED:
           U-box domain-containing protein 44-like [Cucumis
           sativus]
          Length = 820

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/98 (73%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
 Frame = +3

Query: 3   GDMQSREAALKALNQISSFEASAKVLIDEGVLPPLVKYLFNVGKNQ-PMRLKEVSATILA 179
           GD QS+EAALKALNQISSF+ SA+VL+ EG+LPPLVK LF V  NQ PM+LKEVSATILA
Sbjct: 329 GDKQSKEAALKALNQISSFDTSARVLVQEGILPPLVKDLFTVSSNQLPMKLKEVSATILA 388

Query: 180 NIVNSGSDFDSIPVGPNHQ-TLVSEGILHKLLHLISNT 290
           N+V+SG DF+SIPV PN+Q TLVSE  +H LL LISNT
Sbjct: 389 NVVSSGCDFNSIPVEPNNQSTLVSEDTIHNLLQLISNT 426


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