BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037304
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   204   6e-51
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]               204   6e-51
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]        204   6e-51
gb|ACB28472.1| polyprotein [Ananas comosus]                           203   1e-50
gb|ABA94541.2| retrotransposon protein, putative, unclassified [...   202   2e-50

>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  204 bits (519), Expect = 6e-51
 Identities = 94/156 (60%), Positives = 124/156 (79%)
 Frame = -3

Query: 470  SEAITTSTTHTQVQGLIDKYSDIFEEPKGLPPHRNHDHHIPLLQGSQPVNQRGYRVPYVQ 291
            +E +T +T    VQ +++++ +IF EP  LPP RN DHHIPL++G++PVN R YR     
Sbjct: 592  AETLTATTVPEIVQPILNEFQEIFSEPTELPPKRNCDHHIPLVEGAKPVNLRPYRYKPAL 651

Query: 290  NLEIEKQVKDMLESGIIQASSSPFASPVILVKKKDNTWRMCVDYRKLNDITVKNKYPIPI 111
              EIE+QV +ML SG+IQ SSSPF+SP +LVKKKD TWR+C+DYR+LND+TVK+KYP+P+
Sbjct: 652  KDEIERQVAEMLRSGVIQPSSSPFSSPALLVKKKDGTWRLCIDYRQLNDVTVKSKYPVPV 711

Query: 110  IDELLDELKGATMFTKLDLRSGYHQIRVAEEDVHKT 3
            IDELLDEL G+  F+KLDLR+GYHQIR+AE D +KT
Sbjct: 712  IDELLDELAGSKWFSKLDLRAGYHQIRMAEGDEYKT 747


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/146 (65%), Positives = 120/146 (82%)
 Frame = -3

Query: 440  TQVQGLIDKYSDIFEEPKGLPPHRNHDHHIPLLQGSQPVNQRGYRVPYVQNLEIEKQVKD 261
            + +Q ++D+++DIF EP+GLPP R++DH IPL+ G+Q VN R YR    Q  EIEKQV++
Sbjct: 609  SSIQSILDEFADIFTEPEGLPPSRSYDHTIPLIAGAQLVNIRPYRYTPDQKNEIEKQVQE 668

Query: 260  MLESGIIQASSSPFASPVILVKKKDNTWRMCVDYRKLNDITVKNKYPIPIIDELLDELKG 81
            ML+ GII+ SSSPF+SPV+LVKKKD TWR CVDYR LN IT+KNKYP+P+IDELLDEL G
Sbjct: 669  MLKKGIIRPSSSPFSSPVLLVKKKDGTWRFCVDYRHLNAITIKNKYPLPVIDELLDELAG 728

Query: 80   ATMFTKLDLRSGYHQIRVAEEDVHKT 3
            A  F+KLDLRSGYHQIR+A +D HKT
Sbjct: 729  ACWFSKLDLRSGYHQIRMAPQDEHKT 754


>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
          Length = 1575

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/146 (65%), Positives = 120/146 (82%)
 Frame = -3

Query: 440  TQVQGLIDKYSDIFEEPKGLPPHRNHDHHIPLLQGSQPVNQRGYRVPYVQNLEIEKQVKD 261
            + +Q ++D+++DIF EP+GLPP R++DH IPL+ G+Q VN R YR    Q  EIEKQV++
Sbjct: 660  SSIQSILDEFADIFTEPEGLPPSRSYDHTIPLIAGAQLVNIRPYRYTPDQKNEIEKQVQE 719

Query: 260  MLESGIIQASSSPFASPVILVKKKDNTWRMCVDYRKLNDITVKNKYPIPIIDELLDELKG 81
            ML+ GII+ SSSPF+SPV+LVKKKD TWR CVDYR LN IT+KNKYP+P+IDELLDEL G
Sbjct: 720  MLKKGIIRPSSSPFSSPVLLVKKKDGTWRFCVDYRHLNAITIKNKYPLPVIDELLDELAG 779

Query: 80   ATMFTKLDLRSGYHQIRVAEEDVHKT 3
            A  F+KLDLRSGYHQIR+A +D HKT
Sbjct: 780  ACWFSKLDLRSGYHQIRMAPQDEHKT 805


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 12/178 (6%)
 Frame = -3

Query: 500 LCLIDAIPKDSEAITTS----TTHT--------QVQGLIDKYSDIFEEPKGLPPHRNHDH 357
           LC I A P++   I TS    TT +        Q+Q L++++SD+FEEP+GLPP R HDH
Sbjct: 160 LCSIHATPQEGNHIATSEDAETTWSGLGKAYSQQLQLLLEEHSDLFEEPQGLPPVRLHDH 219

Query: 356 HIPLLQGSQPVNQRGYRVPYVQNLEIEKQVKDMLESGIIQASSSPFASPVILVKKKDNTW 177
            IPL +G+ P+N R YR P  Q  EIEK V++ML  G+I  S+SP++SPV+LVKKKD +W
Sbjct: 220 KIPLKEGTNPINVRPYRYPAYQKTEIEKLVQEMLSQGVITPSNSPYSSPVVLVKKKDGSW 279

Query: 176 RMCVDYRKLNDITVKNKYPIPIIDELLDELKGATMFTKLDLRSGYHQIRVAEEDVHKT 3
           R+C+DYR LND T+K+K+PIP++DELLDEL GA +F++LDLRSGYHQIR+  +D+ KT
Sbjct: 280 RLCIDYRSLNDSTIKDKFPIPLVDELLDELSGAKLFSELDLRSGYHQIRMHADDISKT 337


>gb|ABA94541.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1347

 Score =  202 bits (515), Expect = 2e-50
 Identities = 100/166 (60%), Positives = 119/166 (71%)
 Frame = -3

Query: 500  LCLIDAIPKDSEAITTSTTHTQVQGLIDKYSDIFEEPKGLPPHRNHDHHIPLLQGSQPVN 321
            LC I  I  + EAI       +++ ++  Y  +F+EP  LPPHR  DH IPLL G++PVN
Sbjct: 533  LCSIQEIAANQEAIPR-----EIEAVLQHYQGLFQEPTELPPHRTFDHEIPLLDGAKPVN 587

Query: 320  QRGYRVPYVQNLEIEKQVKDMLESGIIQASSSPFASPVILVKKKDNTWRMCVDYRKLNDI 141
             + YR    Q  EIEKQV  ML+ G+IQ S SPFASPV+LVKKKD TWR CVDYR LNDI
Sbjct: 588  IKPYRYAPKQKDEIEKQVTQMLQHGVIQPSHSPFASPVLLVKKKDGTWRFCVDYRGLNDI 647

Query: 140  TVKNKYPIPIIDELLDELKGATMFTKLDLRSGYHQIRVAEEDVHKT 3
            TVKNKYP+P++DELLDEL G   FTKLDLRSGYHQIR+ E+D  KT
Sbjct: 648  TVKNKYPMPVVDELLDELSGLKWFTKLDLRSGYHQIRLVEKDEFKT 693