BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037274
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511599.1| pentatricopeptide repeat-containing protein,...   333   2e-89
emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   328   9e-88
ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   327   2e-87
ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|2...   321   9e-86
ref|XP_002880144.1| pentatricopeptide repeat-containing protein ...   296   4e-78

>ref|XP_002511599.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548779|gb|EEF50268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 429

 Score =  333 bits (855), Expect = 2e-89
 Identities = 154/247 (62%), Positives = 197/247 (79%)
 Frame = +3

Query: 3   GFVPDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCA 182
           GF+PD+FTF  LAKSC   + + EG E+HNHV+K GFG  L+VST+L+DMYAK   +  A
Sbjct: 83  GFLPDNFTFTALAKSCGLNMAVWEGFEIHNHVLKMGFGLDLYVSTALVDMYAKFGELCMA 142

Query: 183 RRLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNMMIDVFAKLGDAD 362
           R++FDEM+E+  VSWTALIGG  R GDM N + LF++MPEKD+AAYN M+D + K GD +
Sbjct: 143 RKMFDEMAERGVVSWTALIGGCMRSGDMGNARILFDQMPEKDSAAYNAMLDGYVKAGDME 202

Query: 363 SARRMFDQMPERNVVSWTSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKE 542
           SA+ +FD+MP RNV+SWTSMI GYC+ GD+++A+ LFD +PE+NL+SWN MIGGY QN +
Sbjct: 203 SAQSLFDKMPARNVISWTSMIYGYCSGGDVLTARSLFDAMPERNLFSWNAMIGGYSQNNK 262

Query: 543 SQEALQLFHRLQTETSLEPDNITIVSVLPAVADLGALDLGCWIHQYVRKMKLDKYANVCT 722
           S EAL+LFH +Q+ T  EPD +T+VSVLPA+ADLGALDLG WIHQ+ R  K+D+  NVCT
Sbjct: 263 SHEALKLFHEMQSRTLFEPDKVTVVSVLPAIADLGALDLGSWIHQFARLKKIDRSINVCT 322

Query: 723 ALVDMYA 743
           ALVDMYA
Sbjct: 323 ALVDMYA 329



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
 Frame = +3

Query: 6   FVPDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCAR 185
           F PD  T +++  + +    L  G  +H           + V T+L+DMYAKC  M  AR
Sbjct: 279 FEPDKVTVVSVLPAIADLGALDLGSWIHQFARLKKIDRSINVCTALVDMYAKCGEMLKAR 338

Query: 186 RLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNM-MIDVFAKL---G 353
           R+FD M +K E SW ALI G+A  G  D     F+ M  +     ++ MI V +     G
Sbjct: 339 RVFDSMPKKEEASWNALINGFAVNGCADEALTAFSEMKREGVKPNDVTMISVLSACNHGG 398

Query: 354 DADSARRMFDQMPE 395
             +  +R F  M E
Sbjct: 399 LVEEGKRWFKAMYE 412


>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  328 bits (840), Expect = 9e-88
 Identities = 157/246 (63%), Positives = 196/246 (79%)
 Frame = +3

Query: 6   FVPDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCAR 185
           F PDSFTF  LAKSC+  + + EG E+H+HVV  GF   L+ +T+L+DMYAK   M CAR
Sbjct: 258 FTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCAR 317

Query: 186 RLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNMMIDVFAKLGDADS 365
           +LFDEM ++S+VSWTALIGGY R GDMDN   LF++M EKD+AA+N MID + KLGD  S
Sbjct: 318 KLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCS 377

Query: 366 ARRMFDQMPERNVVSWTSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKES 545
           AR++FD+MPER+VVSWT MI GY + G+L SA+ LFD +PEKNL+SWN MI GY QNK+ 
Sbjct: 378 ARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQP 437

Query: 546 QEALQLFHRLQTETSLEPDNITIVSVLPAVADLGALDLGCWIHQYVRKMKLDKYANVCTA 725
            EAL+LFH +Q+ TSLEPD +TIVSVLPA+ADLGALDLG W+H++VR+ KLD+  NV TA
Sbjct: 438 YEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTA 497

Query: 726 LVDMYA 743
           L+DMYA
Sbjct: 498 LIDMYA 503



 Score =  103 bits (257), Expect = 4e-20
 Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 40/215 (18%)
 Frame = +3

Query: 138  SLIDMYAKCMNMGCARRLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAA 317
            ++ID Y K  +M  AR+LFDEM E+S VSWT +I GY+  G++D+ + LF+ MPEK+  +
Sbjct: 364  TMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFS 423

Query: 318  YNMMIDVFAKLGDADSARRMFDQMP--------ERNVVS---------------W----- 413
            +N MI  + +      A ++F +M         E  +VS               W     
Sbjct: 424  WNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFV 483

Query: 414  ------------TSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKESQEAL 557
                        T++I  Y   G++V ++ +FD +PEK   SWN +I  +  N  ++EAL
Sbjct: 484  RRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEAL 543

Query: 558  QLFHRLQTETSLEPDNITIVSVLPAVADLGALDLG 662
             LF  +       P+ IT++ VL A    G ++ G
Sbjct: 544  GLFMEM-NHKGFMPNEITMIGVLSACNHSGLVEEG 577



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
 Frame = +3

Query: 12  PDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCARRL 191
           PD  T +++  + +    L  G  VH  V +        V T+LIDMYAKC  +  +R +
Sbjct: 455 PDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGV 514

Query: 192 FDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNM-MIDVFAKL---GDA 359
           FD M EK   SW ALI  +A  G       LF  M  K      + MI V +     G  
Sbjct: 515 FDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLV 574

Query: 360 DSARRMFDQMPE----RNVVSWTSMIVGYCNVGDLVSAKLLFDEIP 485
           +  +R F  M E      +  +  M+      G L  A+ L + +P
Sbjct: 575 EEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMP 620


>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  327 bits (838), Expect = 2e-87
 Identities = 157/246 (63%), Positives = 196/246 (79%)
 Frame = +3

Query: 6   FVPDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCAR 185
           F PDSFTF  LAKSC+  + + EG E+H+HVV  GF   L+ +T+L+DMYAK   M CAR
Sbjct: 84  FTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCAR 143

Query: 186 RLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNMMIDVFAKLGDADS 365
           +LFDEM ++S+VSWTALIGGY R GDMDN   LF++M EKD+AA+N MID + KLGD  S
Sbjct: 144 KLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCS 203

Query: 366 ARRMFDQMPERNVVSWTSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKES 545
           AR++FD+MPER+VVSWT MI GY + G+L SA+ LFD +PEKNL+SWN MI GY QNK+ 
Sbjct: 204 ARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQP 263

Query: 546 QEALQLFHRLQTETSLEPDNITIVSVLPAVADLGALDLGCWIHQYVRKMKLDKYANVCTA 725
            EAL+LFH +Q+ TSLEPD +TIVSVLPA+ADLGALDLG W+H++VR+ KLD+  NV TA
Sbjct: 264 YEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTA 323

Query: 726 LVDMYA 743
           L+DMYA
Sbjct: 324 LIDMYA 329



 Score =  103 bits (257), Expect = 4e-20
 Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 40/215 (18%)
 Frame = +3

Query: 138 SLIDMYAKCMNMGCARRLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAA 317
           ++ID Y K  +M  AR+LFDEM E+S VSWT +I GY+  G++D+ + LF+ MPEK+  +
Sbjct: 190 TMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFS 249

Query: 318 YNMMIDVFAKLGDADSARRMFDQMP--------ERNVVS---------------W----- 413
           +N MI  + +      A ++F +M         E  +VS               W     
Sbjct: 250 WNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFV 309

Query: 414 ------------TSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKESQEAL 557
                       T++I  Y   G++V ++ +FD +PEK   SWN +I  +  N  ++EAL
Sbjct: 310 RRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEAL 369

Query: 558 QLFHRLQTETSLEPDNITIVSVLPAVADLGALDLG 662
            LF  +       P+ IT++ VL A    G ++ G
Sbjct: 370 GLFMEM-NHKGFMPNEITMIGVLSACNHSGLVEEG 403



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
 Frame = +3

Query: 12  PDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCARRL 191
           PD  T +++  + +    L  G  VH  V +        V T+LIDMYAKC  +  +R +
Sbjct: 281 PDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGV 340

Query: 192 FDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNM-MIDVFAKL---GDA 359
           FD M EK   SW ALI  +A  G       LF  M  K      + MI V +     G  
Sbjct: 341 FDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLV 400

Query: 360 DSARRMFDQMPE----RNVVSWTSMIVGYCNVGDLVSAKLLFDEIP 485
           +  +R F  M E      +  +  M+      G L  A+ L + +P
Sbjct: 401 EEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMP 446


>ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|222835186|gb|EEE73621.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  321 bits (823), Expect = 9e-86
 Identities = 148/245 (60%), Positives = 194/245 (79%)
 Frame = +3

Query: 6   FVPDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCAR 185
           FVPD+FTF  LAK C+  + + EG+E H HVVK GF   ++VST+L+DMYAK  N+G AR
Sbjct: 98  FVPDNFTFTVLAKCCALRMAVWEGLETHGHVVKIGFCFDMYVSTALVDMYAKFGNLGLAR 157

Query: 186 RLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNMMIDVFAKLGDADS 365
           ++F++M ++S VSWTALIGGY R GDM N   LF  MP +D+AA+N++ID + K+GD +S
Sbjct: 158 KVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMES 217

Query: 366 ARRMFDQMPERNVVSWTSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKES 545
           AR +FD+MPERNV+SWTSMI GYCN GD++SA+ LFD +PEKNL SWN MIGGYCQNK+ 
Sbjct: 218 ARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQP 277

Query: 546 QEALQLFHRLQTETSLEPDNITIVSVLPAVADLGALDLGCWIHQYVRKMKLDKYANVCTA 725
            EAL+LF  LQ+ T  EP+ +T+VS+LPA+A LGAL+LG W+H++V++ KLD   NVCT+
Sbjct: 278 HEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCTS 337

Query: 726 LVDMY 740
           LVDMY
Sbjct: 338 LVDMY 342



 Score =  103 bits (258), Expect = 3e-20
 Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 40/214 (18%)
 Frame = +3

Query: 141 LIDMYAKCMNMGCARRLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAY 320
           LID Y K  +M  AR LFDEM E++ +SWT++I GY   GD+ + + LF+ MPEK+  ++
Sbjct: 205 LIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSW 264

Query: 321 NMMIDVFAKLGDADSARRMFDQMP--------ERNVVS---------------W------ 413
           N MI  + +      A ++F ++         E  VVS               W      
Sbjct: 265 NAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFVQ 324

Query: 414 -----------TSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKESQEALQ 560
                      TS++  Y   G++  A+ +F EIP+K   +WN +I G+  N  + EAL+
Sbjct: 325 RKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLASEALE 384

Query: 561 LFHRLQTETSLEPDNITIVSVLPAVADLGALDLG 662
            F  +Q E  ++P++IT+  VL A +  G ++ G
Sbjct: 385 AFSEMQQE-GIKPNDITMTGVLSACSHGGLVEEG 417



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 31/100 (31%), Positives = 53/100 (53%)
 Frame = +3

Query: 6   FVPDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCAR 185
           F P+  T +++  + ++   L  G  VH  V +    + + V TSL+DMY KC  +  AR
Sbjct: 293 FEPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKAR 352

Query: 186 RLFDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEK 305
           ++F E+ +K   +W ALI G+A  G      + F+ M ++
Sbjct: 353 KVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQE 392


>ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325983|gb|EFH56403.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 555

 Score =  296 bits (757), Expect = 4e-78
 Identities = 134/245 (54%), Positives = 187/245 (76%), Gaps = 1/245 (0%)
 Frame = +3

Query: 12  PDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCARRL 191
           PD+FTF  + KSC+  + + +G+++H+ + +SGF + ++VST ++DMYAK   MGCAR +
Sbjct: 76  PDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCARNV 135

Query: 192 FDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPE-KDTAAYNMMIDVFAKLGDADSA 368
           FDEM ++SEVSWTALI GY R+G++D    LF++MP+ KD   YN M+D F K GD  SA
Sbjct: 136 FDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDMTSA 195

Query: 369 RRMFDQMPERNVVSWTSMIVGYCNVGDLVSAKLLFDEIPEKNLYSWNTMIGGYCQNKESQ 548
           RR+FD+M  + V++WT+MI GYCN  D+ SA+ LFD +PE+NL SWNTMIGGYCQNK+ Q
Sbjct: 196 RRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255

Query: 549 EALQLFHRLQTETSLEPDNITIVSVLPAVADLGALDLGCWIHQYVRKMKLDKYANVCTAL 728
           EA++LF  +Q  TSL+PD++TI+SVLPA++D GAL LG W H +V++  LDK   VCTA+
Sbjct: 256 EAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAI 315

Query: 729 VDMYA 743
           +DMY+
Sbjct: 316 LDMYS 320



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
 Frame = +3

Query: 12  PDSFTFLNLAKSCSSELGLREGMEVHNHVVKSGFGSYLFVSTSLIDMYAKCMNMGCARRL 191
           PD  T L++  + S    L  G   H  V +      + V T+++DMY+KC  +  A+R+
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRI 331

Query: 192 FDEMSEKSEVSWTALIGGYARYGDMDNVKDLFNRMPEKDTAAYNMMIDVFAKL---GDAD 362
           FDEM EK   SW A+I GYA  G+     DLF  M +++      M+ V +     G  +
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEEKPDEITMLAVISACNHGGLVE 391

Query: 363 SARRMFDQMPE----RNVVSWTSMIVGYCNVGDLVSAKLLFDEIPEK-NLYSWNTMIGGY 527
             R+ F  M +      +  +  M+      G+L  A+ L   +P K N    ++ +   
Sbjct: 392 EGRKWFQMMRKFGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMPFKPNGIILSSFLSAC 451

Query: 528 CQNKESQEALQLFHRLQTETSLEPDN 605
            Q K+ + A ++   L+    LEP N
Sbjct: 452 GQYKDIERAERI---LKKAVELEPQN 474