BLASTX nr result

ID: Cnidium21_contig00037259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037259
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   106   2e-21
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   102   3e-20
ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   102   3e-20
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...    99   3e-19

>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = +1

Query: 1   VISVMDPLRSWAARWLRIGRFRPGCYTLAVSEPLPEDLQNLCEDEHVPYNPPKRI 165
           +ISVMDP RSWAARWLRIGRF PGCYTLAVSE LPEDLQNLCEDE VPY PPKR+
Sbjct: 62  IISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116


>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = +1

Query: 1   VISVMDPLRSWAARWLRIGRFRPGCYTLAVSEPLPEDLQNLCEDEHVPYNPPKRI 165
           +ISVMDP RSWAARWLRIGRF PGCYTLAVSE LPEDLQNLCEDE VPY PPKR+
Sbjct: 62  IISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = +1

Query: 1   VISVMDPLRSWAARWLRIGRFRPGCYTLAVSEPLPEDLQNLCEDEHVPYNPPKRI 165
           +ISVMDP RSWAARWLRIGRF PGCYTLAVSE LPEDLQNLCE+E V Y PPKR+
Sbjct: 62  IISVMDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPKRV 116


>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = +1

Query: 1   VISVMDPLRSWAARWLRIGRFRPGCYTLAVSEPLPEDLQNLCEDEHVPYNPPKRI 165
           +ISVMDP RSWAARWLRIGRF PGCYTLAVSE LPEDLQ LCE+E V YNPPKR+
Sbjct: 62  IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPKRV 116


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/54 (83%), Positives = 48/54 (88%)
 Frame = +1

Query: 1   VISVMDPLRSWAARWLRIGRFRPGCYTLAVSEPLPEDLQNLCEDEHVPYNPPKR 162
           +IS+MDP RSWAARWLRIGRF PGCYTLAVSE LPEDLQNLCE+E V Y PPKR
Sbjct: 61  IISMMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYVPPKR 114


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