BLASTX nr result

ID: Cnidium21_contig00037236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037236
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]     146   2e-33

>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/98 (70%), Positives = 89/98 (90%)
 Frame = -2

Query: 294 KPRVEHYTCMVDLLGRSGRLEEAEAFVRSMPVKADAVIWKTLLSACKTYKNADMAKRIAA 115
           K R++HYTC+VDLLGRSG LEEAEA +RSMPVKADA+IWKTLLSACK +KNA++A+R+A 
Sbjct: 436 KARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVAD 495

Query: 114 EVLSLDPHDAASYVLLSSIQASAKRWQDVSDLRKAMRD 1
           EVL +DP D+ASYVLL++I +SA RWQ+VS++R+AM+D
Sbjct: 496 EVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKD 533


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/98 (69%), Positives = 85/98 (86%)
 Frame = -2

Query: 294 KPRVEHYTCMVDLLGRSGRLEEAEAFVRSMPVKADAVIWKTLLSACKTYKNADMAKRIAA 115
           KPR+EHYTC+VDLLGR+GRLEEAE  +RSMPV+ D +IWKTLL+ACK +K A+MA+RI+ 
Sbjct: 429 KPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISE 488

Query: 114 EVLSLDPHDAASYVLLSSIQASAKRWQDVSDLRKAMRD 1
           E++ LDP DAASYVLLS+I ASA+ W +VS +RKAMRD
Sbjct: 489 EIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRD 526


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/98 (71%), Positives = 80/98 (81%)
 Frame = -2

Query: 294 KPRVEHYTCMVDLLGRSGRLEEAEAFVRSMPVKADAVIWKTLLSACKTYKNADMAKRIAA 115
           KPR+EHYTCMVDLLGR G +EEAEA +RSMPVKAD + WKTLLSACK +K  +MA+RI+ 
Sbjct: 419 KPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISE 478

Query: 114 EVLSLDPHDAASYVLLSSIQASAKRWQDVSDLRKAMRD 1
           EV  LDP D   YVLLS+I AS KRW DVSD+RKAMRD
Sbjct: 479 EVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRD 516


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/98 (70%), Positives = 85/98 (86%)
 Frame = -2

Query: 294 KPRVEHYTCMVDLLGRSGRLEEAEAFVRSMPVKADAVIWKTLLSACKTYKNADMAKRIAA 115
           KPR+EHYTC+VDLLGRSG L+EAEA +RSMP++AD VIWKTLLSAC+ ++NADMA R A 
Sbjct: 324 KPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAE 383

Query: 114 EVLSLDPHDAASYVLLSSIQASAKRWQDVSDLRKAMRD 1
           E+L L+P D+A+YVLLS+I ASAKRW+DVS +R  MRD
Sbjct: 384 EILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRD 421


>gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 704

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/98 (70%), Positives = 85/98 (86%)
 Frame = -2

Query: 294 KPRVEHYTCMVDLLGRSGRLEEAEAFVRSMPVKADAVIWKTLLSACKTYKNADMAKRIAA 115
           +P V+HYTC+VDLLGRSG L+EAEA + SMP+  D VIWKTLLSACKT KN DMA+RIA 
Sbjct: 474 QPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAK 533

Query: 114 EVLSLDPHDAASYVLLSSIQASAKRWQDVSDLRKAMRD 1
            V+ LDPHD+ASYVLLS+I+A+++RW DVS++RKAMRD
Sbjct: 534 RVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRD 571


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