BLASTX nr result

ID: Cnidium21_contig00037226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037226
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   183   1e-44
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   173   1e-41
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              173   1e-41
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   171   7e-41
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38

>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/135 (64%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
 Frame = +1

Query: 1   AKVNNEEKDRSFSATAGWQAVRAAGNVSVAEINHSLSS----DEKHEFEVESDGSLPFYL 168
           AK++ EEKD +FSA A WQAVR+ GN SVA +   + S    DE+ EFE+E+DGSLPFY+
Sbjct: 284 AKISIEEKDPAFSAMADWQAVRSGGNGSVAGVTEEVKSGVVCDEQSEFELEADGSLPFYI 343

Query: 169 LDAHEEFYGVNAGNLYLFGKVKVGNSYQSCCVVVKNMQRCVYAIPNGSVFQKDTVAKLEK 348
           +DAHEE +G N G LYLFGKVK GN+Y SCC+VVKNMQRCVYAIPNGS+F  + + +LEK
Sbjct: 344 IDAHEEIFGANMGTLYLFGKVKAGNTYHSCCMVVKNMQRCVYAIPNGSIFHTEDMIRLEK 403

Query: 349 DVEESKISPTAFRSK 393
           DVEES+ISP  FR K
Sbjct: 404 DVEESRISPAEFRKK 418


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/131 (64%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
 Frame = +1

Query: 16  EEKDRSFSA-TAGWQAVRAAGNVSVAE----INHSLSSDEKHEFEVESDGSLPFYLLDAH 180
           EEKD + SA TAGWQAVR  GN S       +N SL+ +EK +F ++SDGSLPFY+LDAH
Sbjct: 289 EEKDLTLSAATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAH 348

Query: 181 EEFYGVNAGNLYLFGKVKVGNSYQSCCVVVKNMQRCVYAIPNGSVFQKDTVAKLEKDVEE 360
           EEFYG N GNLYLFGKVK G++Y SCCVVVKNM+RCVYAIPN SVF  D + +LEKD+E 
Sbjct: 349 EEFYGANMGNLYLFGKVKAGSAYHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEA 408

Query: 361 SKISPTAFRSK 393
           S++SP A R+K
Sbjct: 409 SRVSPAALRTK 419


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/131 (64%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
 Frame = +1

Query: 16  EEKDRSFSA-TAGWQAVRAAGNVSVAE----INHSLSSDEKHEFEVESDGSLPFYLLDAH 180
           EEKD + SA TAGWQAVR  GN S       +N SL+ +EK +F ++SDGSLPFY+LDAH
Sbjct: 290 EEKDLTLSAATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAH 349

Query: 181 EEFYGVNAGNLYLFGKVKVGNSYQSCCVVVKNMQRCVYAIPNGSVFQKDTVAKLEKDVEE 360
           EEFYG N GNLYLFGKVK G++Y SCCVVVKNM+RCVYAIPN SVF  D + +LEKD+E 
Sbjct: 350 EEFYGANMGNLYLFGKVKAGSAYHSCCVVVKNMERCVYAIPNDSVFGNDEIMRLEKDIEA 409

Query: 361 SKISPTAFRSK 393
           S++SP A R+K
Sbjct: 410 SRVSPAALRTK 420


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/131 (62%), Positives = 105/131 (80%), Gaps = 4/131 (3%)
 Frame = +1

Query: 13  NEEKDRSFSATAGWQAVRAAGNVSVAEINHS----LSSDEKHEFEVESDGSLPFYLLDAH 180
           +E KD   SATA WQA+R AG+  +   N S    ++++EK +FE++SDGSLPF++LDAH
Sbjct: 326 SEGKDPGLSATAEWQALRNAGS-GILNCNESEAKLVNTEEKTDFELDSDGSLPFFILDAH 384

Query: 181 EEFYGVNAGNLYLFGKVKVGNSYQSCCVVVKNMQRCVYAIPNGSVFQKDTVAKLEKDVEE 360
           EE YG NAGN+YLFGKVK G +Y SCC+VVKNMQRCVYA+PNGSVF  DT++KL +DVEE
Sbjct: 385 EELYGTNAGNIYLFGKVKAGGTYHSCCIVVKNMQRCVYAVPNGSVFCGDTISKLSRDVEE 444

Query: 361 SKISPTAFRSK 393
           S+ISP+AF S+
Sbjct: 445 SQISPSAFLSQ 455


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/139 (56%), Positives = 100/139 (71%), Gaps = 8/139 (5%)
 Frame = +1

Query: 1   AKVNNEEKDRSFSATAGWQAV-------RAAGNVSVAE-INHSLSSDEKHEFEVESDGSL 156
           AK+++EE+D + SATAGW+ V        A G   V E +    + +E+ EFE++ DGSL
Sbjct: 66  AKISDEERDPALSATAGWKEVMNGKNGGEAVGGAGVVEEVKSGANCEEQSEFELDGDGSL 125

Query: 157 PFYLLDAHEEFYGVNAGNLYLFGKVKVGNSYQSCCVVVKNMQRCVYAIPNGSVFQKDTVA 336
           PFY+LDAHEE +G N G +YLFGKVK GN+Y SCCVVVKNM RCVYAIPN S+F+ D ++
Sbjct: 126 PFYILDAHEEIFGANRGTIYLFGKVKAGNTYHSCCVVVKNMHRCVYAIPNSSIFRTDEMS 185

Query: 337 KLEKDVEESKISPTAFRSK 393
            LEK+VEES+IS T F  K
Sbjct: 186 MLEKEVEESRISSTDFHKK 204


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