BLASTX nr result
ID: Cnidium21_contig00037178
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00037178 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula... 102 3e-20 ref|XP_003588309.1| hypothetical protein MTR_1g005780 [Medicago ... 77 1e-12 emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera] 70 1e-10 ref|XP_002489008.1| hypothetical protein SORBIDRAFT_0506s002170 ... 58 7e-07 gb|AAR86717.1| zinc finger protein [Populus euphratica] 45 6e-06 >ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula] gi|355477331|gb|AES58534.1| Cytochrome c biogenesis [Medicago truncatula] Length = 860 Score = 102 bits (254), Expect = 3e-20 Identities = 62/111 (55%), Positives = 71/111 (63%), Gaps = 7/111 (6%) Frame = -2 Query: 312 QKASPGRGQHRMKGTALMLALPTSWVAGGEKRTWGLGA---GRSVTKRAIPFRARESG-- 148 +K +PG+G+HRMKG ALML W + + GL A GR + R G Sbjct: 356 KKPAPGQGRHRMKGMALMLC----W----QSQLLGLRAEKSGRGDSDRGAYINGFWGGFA 407 Query: 147 --RSGVRPDWQLLGLPISPKLPPVFGPSCMRQKLVSRTVRRPSPTPAVRVR 1 ++ RPD QLLGLPISPKLPPVFGPSCMRQKL RTVRRPSPTPAV VR Sbjct: 408 SSQAYPRPDRQLLGLPISPKLPPVFGPSCMRQKLAPRTVRRPSPTPAVMVR 458 >ref|XP_003588309.1| hypothetical protein MTR_1g005780 [Medicago truncatula] gi|355477357|gb|AES58560.1| hypothetical protein MTR_1g005780 [Medicago truncatula] Length = 91 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/57 (71%), Positives = 42/57 (73%), Gaps = 2/57 (3%) Frame = +2 Query: 173 MALLVTLRPAPSPHVRFSPPATQEVGKAN--IRAVPFILC*PRPGLAFWEARSHRAH 337 MALLVTLRP SPHVR SPPATQEVG AN + P P PGLAFWEARSHRAH Sbjct: 1 MALLVTLRPGLSPHVRSSPPATQEVGFANTTLGPSPSFYADPGPGLAFWEARSHRAH 57 >emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera] Length = 194 Score = 70.5 bits (171), Expect = 1e-10 Identities = 30/36 (83%), Positives = 36/36 (100%) Frame = -2 Query: 249 PTSWVAGGEKRTWGLGAGRSVTKRAIPFRARESGRS 142 PTSWVAGGE++TWGLG+GRSVTKRAIPFRAR++GR+ Sbjct: 87 PTSWVAGGEEQTWGLGSGRSVTKRAIPFRARQNGRA 122 >ref|XP_002489008.1| hypothetical protein SORBIDRAFT_0506s002170 [Sorghum bicolor] gi|241947355|gb|EES20500.1| hypothetical protein SORBIDRAFT_0506s002170 [Sorghum bicolor] Length = 67 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/39 (69%), Positives = 30/39 (76%) Frame = -2 Query: 117 LGLPISPKLPPVFGPSCMRQKLVSRTVRRPSPTPAVRVR 1 +G P PVFGPSCMRQKLV RTVRRPSPTPA+ V+ Sbjct: 25 VGSPHLSSTSPVFGPSCMRQKLVPRTVRRPSPTPAIMVQ 63 >gb|AAR86717.1| zinc finger protein [Populus euphratica] Length = 218 Score = 44.7 bits (104), Expect(2) = 6e-06 Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 7/67 (10%) Frame = -1 Query: 325 GTGFPKSQPGPGSA*NERDGPNVGFANFLGC-------GRRKADVGTRGGAQRN*ESHSI 167 G G PK +P PG + G + N + G +ADVGTR GAQ N ESHSI Sbjct: 88 GNGLPK-KPAPGRGQHRMKG--MALTNVVSALPTSWVTGGERADVGTRVGAQPNEESHSI 144 Query: 166 *GERKWA 146 GE +WA Sbjct: 145 LGETEWA 151 Score = 30.0 bits (66), Expect(2) = 6e-06 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -3 Query: 335 ERGGNGLPKKPA 300 ERGGNGLPKKPA Sbjct: 85 ERGGNGLPKKPA 96