BLASTX nr result

ID: Cnidium21_contig00037178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037178
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula...   102   3e-20
ref|XP_003588309.1| hypothetical protein MTR_1g005780 [Medicago ...    77   1e-12
emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]    70   1e-10
ref|XP_002489008.1| hypothetical protein SORBIDRAFT_0506s002170 ...    58   7e-07
gb|AAR86717.1| zinc finger protein [Populus euphratica]                45   6e-06

>ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula]
           gi|355477331|gb|AES58534.1| Cytochrome c biogenesis
           [Medicago truncatula]
          Length = 860

 Score =  102 bits (254), Expect = 3e-20
 Identities = 62/111 (55%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
 Frame = -2

Query: 312 QKASPGRGQHRMKGTALMLALPTSWVAGGEKRTWGLGA---GRSVTKRAIPFRARESG-- 148
           +K +PG+G+HRMKG ALML     W    + +  GL A   GR  + R         G  
Sbjct: 356 KKPAPGQGRHRMKGMALMLC----W----QSQLLGLRAEKSGRGDSDRGAYINGFWGGFA 407

Query: 147 --RSGVRPDWQLLGLPISPKLPPVFGPSCMRQKLVSRTVRRPSPTPAVRVR 1
             ++  RPD QLLGLPISPKLPPVFGPSCMRQKL  RTVRRPSPTPAV VR
Sbjct: 408 SSQAYPRPDRQLLGLPISPKLPPVFGPSCMRQKLAPRTVRRPSPTPAVMVR 458


>ref|XP_003588309.1| hypothetical protein MTR_1g005780 [Medicago truncatula]
           gi|355477357|gb|AES58560.1| hypothetical protein
           MTR_1g005780 [Medicago truncatula]
          Length = 91

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/57 (71%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = +2

Query: 173 MALLVTLRPAPSPHVRFSPPATQEVGKAN--IRAVPFILC*PRPGLAFWEARSHRAH 337
           MALLVTLRP  SPHVR SPPATQEVG AN  +   P     P PGLAFWEARSHRAH
Sbjct: 1   MALLVTLRPGLSPHVRSSPPATQEVGFANTTLGPSPSFYADPGPGLAFWEARSHRAH 57


>emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]
          Length = 194

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/36 (83%), Positives = 36/36 (100%)
 Frame = -2

Query: 249 PTSWVAGGEKRTWGLGAGRSVTKRAIPFRARESGRS 142
           PTSWVAGGE++TWGLG+GRSVTKRAIPFRAR++GR+
Sbjct: 87  PTSWVAGGEEQTWGLGSGRSVTKRAIPFRARQNGRA 122


>ref|XP_002489008.1| hypothetical protein SORBIDRAFT_0506s002170 [Sorghum bicolor]
           gi|241947355|gb|EES20500.1| hypothetical protein
           SORBIDRAFT_0506s002170 [Sorghum bicolor]
          Length = 67

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = -2

Query: 117 LGLPISPKLPPVFGPSCMRQKLVSRTVRRPSPTPAVRVR 1
           +G P      PVFGPSCMRQKLV RTVRRPSPTPA+ V+
Sbjct: 25  VGSPHLSSTSPVFGPSCMRQKLVPRTVRRPSPTPAIMVQ 63


>gb|AAR86717.1| zinc finger protein [Populus euphratica]
          Length = 218

 Score = 44.7 bits (104), Expect(2) = 6e-06
 Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
 Frame = -1

Query: 325 GTGFPKSQPGPGSA*NERDGPNVGFANFLGC-------GRRKADVGTRGGAQRN*ESHSI 167
           G G PK +P PG   +   G  +   N +         G  +ADVGTR GAQ N ESHSI
Sbjct: 88  GNGLPK-KPAPGRGQHRMKG--MALTNVVSALPTSWVTGGERADVGTRVGAQPNEESHSI 144

Query: 166 *GERKWA 146
            GE +WA
Sbjct: 145 LGETEWA 151



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 335 ERGGNGLPKKPA 300
           ERGGNGLPKKPA
Sbjct: 85  ERGGNGLPKKPA 96


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