BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037161
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001170089.1| uncharacterized protein LOC100384007 [Zea ma...    96   2e-18
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]          94   1e-17
gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]            94   1e-17
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...    94   1e-17
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]      94   1e-17

>ref|NP_001170089.1| uncharacterized protein LOC100384007 [Zea mays]
           gi|224033369|gb|ACN35760.1| unknown [Zea mays]
          Length = 97

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/76 (57%), Positives = 58/76 (76%)
 Frame = +3

Query: 3   DNQSAIAMTGNPVQHSLTKHISIRYHFIREQVEKGTIELHFVPTDQQLADIFTKPLPEAT 182
           DN+SAI M  NPV+HS TKHI+IRYHF+R+  +KG IE+ ++ T  QLADIFTKPL E T
Sbjct: 20  DNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQT 79

Query: 183 FNKLVNELGMVNYEKY 230
           FNKL +EL +++   +
Sbjct: 80  FNKLRHELNILDSRNF 95


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = +3

Query: 3    DNQSAIAMTGNPVQHSLTKHISIRYHFIREQVEKGTIELHFVPTDQQLADIFTKPLPEAT 182
            DN+SAI M  NPV+HS TKHI+IRYHF+R+  +KG IE+ ++ T  QLADIFTKPL E T
Sbjct: 1683 DNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQT 1742

Query: 183  FNKLVNELGMVNYEKY 230
            F KL +EL +++   +
Sbjct: 1743 FTKLRHELNILDSRNF 1758


>gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]
          Length = 1063

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = +3

Query: 3    DNQSAIAMTGNPVQHSLTKHISIRYHFIREQVEKGTIELHFVPTDQQLADIFTKPLPEAT 182
            DN+SAI M  NPV+HS TKHI+IRYHF+R+  +KG IE+ ++ T  QLADIFTKPL E T
Sbjct: 986  DNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQT 1045

Query: 183  FNKLVNELGMVNYEKY 230
            F KL +EL +++   +
Sbjct: 1046 FTKLRHELNILDSRNF 1061


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +3

Query: 3    DNQSAIAMTGNPVQHSLTKHISIRYHFIREQVEKGTIELHFVPTDQQLADIFTKPLPEAT 182
            DN SAI +  NPVQHS TKHI IRYHF+R+ VEKGTI L FV +++QLADIFTKPL  + 
Sbjct: 1719 DNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSR 1778

Query: 183  FNKLVNELGMVNYE 224
            F  L +ELG++  +
Sbjct: 1779 FEFLRSELGVIGVD 1792


>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/72 (62%), Positives = 56/72 (77%)
 Frame = +3

Query: 3    DNQSAIAMTGNPVQHSLTKHISIRYHFIREQVEKGTIELHFVPTDQQLADIFTKPLPEAT 182
            DN SAI +  NPVQHS TKHI IRYHF+R+ VEKGTI L FV +++QLADIFTKPL  + 
Sbjct: 1723 DNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSR 1782

Query: 183  FNKLVNELGMVN 218
            F  L +ELG+++
Sbjct: 1783 FEFLRSELGVIH 1794