BLASTX nr result

ID: Cnidium21_contig00037149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037149
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   246   3e-63
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   242   7e-62
gb|AFK47046.1| unknown [Lotus japonicus]                              224   2e-56
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   215   7e-54
ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containi...   213   5e-53

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  246 bits (629), Expect = 3e-63
 Identities = 123/240 (51%), Positives = 161/240 (67%)
 Frame = -1

Query: 775 LLTKMEADPLVTMDWNAYVVAAKGYLRVRNKVKALESLKKSEQLVAVSSRKIAYEIYMTM 596
           LL K+E DP V  DWNAY+VAA GYL+   K KA+E LKKSEQ ++  SR+  YEI +T+
Sbjct: 227 LLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTL 286

Query: 595 YARMGNKEEVHRIWKLYKSHCKFYNMGYLCMMSSLAKMDDLDAAQEVFDEWEVKKTTFDI 416
           YA MGNK EV+RIW LYK+  KF+N GY+ M+SSL K+DD+D A++ F+EW      FD 
Sbjct: 287 YATMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDF 346

Query: 415 QLPNFLISAYCKKGLMEKAESLCQRLLDNGNEPNGGTWTRVAFGYQKQKQMEKAVETLNK 236
           ++PN LI AYCKKGL+EKAE L  R ++ G EP   TW  +A GY +  QMEKAV+TL K
Sbjct: 347 RVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKK 406

Query: 235 SILASEPGSKLYFPVLDACLIYLKERGDLDRIEHIKRLLAGQGHDYTHVFERLATYSKEE 56
           ++LA+  G K     L ACL YLK +GD++  E++ RLL  Q     +  +RL  Y + E
Sbjct: 407 ALLATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDSDRLVNYIRSE 466


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  242 bits (617), Expect = 7e-62
 Identities = 121/240 (50%), Positives = 159/240 (66%)
 Frame = -1

Query: 775 LLTKMEADPLVTMDWNAYVVAAKGYLRVRNKVKALESLKKSEQLVAVSSRKIAYEIYMTM 596
           LL K+E DP V  DWNAY+VAA GYL+   K KA+E LKKSEQ ++  SR+  YEI +T+
Sbjct: 227 LLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTL 286

Query: 595 YARMGNKEEVHRIWKLYKSHCKFYNMGYLCMMSSLAKMDDLDAAQEVFDEWEVKKTTFDI 416
           YA MGNK E +RIW LYK+  KF+N GY+ M+SSL K+DD+D A++ F+EW      FD 
Sbjct: 287 YATMGNKTEXYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDF 346

Query: 415 QLPNFLISAYCKKGLMEKAESLCQRLLDNGNEPNGGTWTRVAFGYQKQKQMEKAVETLNK 236
           ++PN LI AYCKKGL+EKAE L  R ++ G EP   TW  +A GY +  QMEKAV+TL K
Sbjct: 347 RVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKK 406

Query: 235 SILASEPGSKLYFPVLDACLIYLKERGDLDRIEHIKRLLAGQGHDYTHVFERLATYSKEE 56
           ++LA+  G K     L ACL YLK + D++  E++ RLL  Q     +  +RL  Y + E
Sbjct: 407 ALLATSQGWKPNPVTLSACLEYLKGKXDVEEAENLIRLLREQSLVSAYDSDRLVNYIRSE 466


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  224 bits (571), Expect = 2e-56
 Identities = 112/247 (45%), Positives = 160/247 (64%)
 Frame = -1

Query: 775 LLTKMEADPLVTMDWNAYVVAAKGYLRVRNKVKALESLKKSEQLVAVSSRKIAYEIYMTM 596
           LL +MEADP+ T+DW  Y  AA GYL+  N  KAL +LKKSEQ V     ++AYE   + 
Sbjct: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285

Query: 595 YARMGNKEEVHRIWKLYKSHCKFYNMGYLCMMSSLAKMDDLDAAQEVFDEWEVKKTTFDI 416
           YA +GNK+EV+R+W   K+    +N  Y+CM+SSL K+DD D A+++  EWE +   FD 
Sbjct: 286 YAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDT 345

Query: 415 QLPNFLISAYCKKGLMEKAESLCQRLLDNGNEPNGGTWTRVAFGYQKQKQMEKAVETLNK 236
           ++PN +I+AYCK+GL++KAE+  Q+LLD+G + +G +W R+A GY     MEKAV+T+ K
Sbjct: 346 RIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405

Query: 235 SILASEPGSKLYFPVLDACLIYLKERGDLDRIEHIKRLLAGQGHDYTHVFERLATYSKEE 56
           +ILA+ PG +     L AC+ YLKE+ DL+    I +L    GH     ++ L +Y+  E
Sbjct: 406 AILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLVSYAHGE 465

Query: 55  INADDEA 35
           I  D EA
Sbjct: 466 I-PDKEA 471


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  215 bits (548), Expect = 7e-54
 Identities = 99/218 (45%), Positives = 150/218 (68%)
 Frame = -1

Query: 775 LLTKMEADPLVTMDWNAYVVAAKGYLRVRNKVKALESLKKSEQLVAVSSRKIAYEIYMTM 596
           LL KME DP +++ ++AYV+AA GYL+     K L  LK+SEQL++ ++R+ AYE  +T+
Sbjct: 232 LLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNTRRFAYEFLLTL 291

Query: 595 YARMGNKEEVHRIWKLYKSHCKFYNMGYLCMMSSLAKMDDLDAAQEVFDEWEVKKTTFDI 416
           Y   GNK EV+RIW  YK   +F+N GY+CM+SSL K+DD+D A+ +F+EW+ KK  FDI
Sbjct: 292 YTASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERIFEEWDSKKVLFDI 351

Query: 415 QLPNFLISAYCKKGLMEKAESLCQRLLDNGNEPNGGTWTRVAFGYQKQKQMEKAVETLNK 236
           ++PN +++ Y +KG +EKAE+   +++ +G EP+  +W  +A GY    QM KAVET+ K
Sbjct: 352 RIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKAVETIRK 411

Query: 235 SILASEPGSKLYFPVLDACLIYLKERGDLDRIEHIKRL 122
           +I  S+PG K     L ACL +LK +GD + +E + ++
Sbjct: 412 AISVSKPGWKPSLLTLSACLEFLKGQGDAETLEELLKI 449


>ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 486

 Score =  213 bits (541), Expect = 5e-53
 Identities = 103/240 (42%), Positives = 148/240 (61%)
 Frame = -1

Query: 775 LLTKMEADPLVTMDWNAYVVAAKGYLRVRNKVKALESLKKSEQLVAVSSRKIAYEIYMTM 596
           LL+KMEADPLV  DW+ Y     GY +      ++  LKK+EQL+    + +AY+  MT+
Sbjct: 229 LLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQLIGDKQKWLAYQYLMTL 288

Query: 595 YARMGNKEEVHRIWKLYKSHCKFYNMGYLCMMSSLAKMDDLDAAQEVFDEWEVKKTTFDI 416
           YA +GNK+EV+R+W LY +  K +N GYLC++SSL K+DD+D A+ +  EWE   T+FD 
Sbjct: 289 YAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTSFDF 348

Query: 415 QLPNFLISAYCKKGLMEKAESLCQRLLDNGNEPNGGTWTRVAFGYQKQKQMEKAVETLNK 236
           ++PN +I++YC KG ++KAE+   RL++NG EP    W R+A GY       KA ETL K
Sbjct: 349 KIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAETLKK 408

Query: 235 SILASEPGSKLYFPVLDACLIYLKERGDLDRIEHIKRLLAGQGHDYTHVFERLATYSKEE 56
           +I  S P  K  + +L ACL YLK  G+++  E I  LL  +     ++ +RL  Y   E
Sbjct: 409 AISVSPPRWKPNYDILAACLEYLKTNGNVELAEEIIGLLCKRDIFPLNICKRLEDYIHSE 468


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