BLASTX nr result

ID: Cnidium21_contig00037140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037140
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20378.3| unnamed protein product [Vitis vinifera]               72   3e-10
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...    72   3e-10
ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus tri...    61   5e-07

>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
 Frame = -1

Query: 961 SGATISREGEKNLISTITSESTERN-EKSLEVAKQVSDQPXXXXXXXXXXXXXSCGTRPV 785
           S   I      +  ST+T E T +  +KSLEV+                    SC TR  
Sbjct: 178 SSVAIKASESNSTTSTVTFEGTHQQPQKSLEVSSGPFGHTSGLLSVMRITLRKSCATRQA 237

Query: 784 TRTDINRVRRXXXXXXXXXXXXXXXXSHPGHDGNNMTSRGTLHNDKTPDSRNAMGIYQAP 605
           +R +IN+ ++                S+PG+D  + T+    + D+TPDSRN M   Q  
Sbjct: 238 SRVEINKCQQSEGCKSSAGKSSVGSSSNPGYDVKDRTATEIRNRDRTPDSRNVMRTSQTA 297

Query: 604 KNILKGPNLSKASPV-VQKICSGPRQKIETAVRKSINQETLKAKVQSRPVHPKVLLPQSE 428
            N  +    SKAS + V    +  R++ +  V KS  ++ +K+KV  + ++ K L+P   
Sbjct: 298 VNRGRASTTSKASNILVDYRTNNSRKEGKRIVAKSTTKDAVKSKVVCQTINRKGLVPL-- 355

Query: 427 RTLGSDSL-IASRTKGKVQVSEQRKRCPSSGKENGLETMTTRKNSLAR 287
           R    D L  A++ K KV V     R    GKEN    +   + S  R
Sbjct: 356 RVNEQDPLTAATKAKSKVGVGAS-NRLAGGGKENASGKLAVSQKSSGR 402


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
 Frame = -1

Query: 961 SGATISREGEKNLISTITSESTERN-EKSLEVAKQVSDQPXXXXXXXXXXXXXSCGTRPV 785
           S   I      +  ST+T E T +  +KSLEV+                    SC TR  
Sbjct: 168 SSVAIKASESNSTTSTVTFEGTHQQPQKSLEVSSGPFGHTSGLLSVMRITLRKSCATRQA 227

Query: 784 TRTDINRVRRXXXXXXXXXXXXXXXXSHPGHDGNNMTSRGTLHNDKTPDSRNAMGIYQAP 605
           +R +IN+ ++                S+PG+D  + T+    + D+TPDSRN M   Q  
Sbjct: 228 SRVEINKCQQSEGCKSSAGKSSVGSSSNPGYDVKDRTATEIRNRDRTPDSRNVMRTSQTA 287

Query: 604 KNILKGPNLSKASPV-VQKICSGPRQKIETAVRKSINQETLKAKVQSRPVHPKVLLPQSE 428
            N  +    SKAS + V    +  R++ +  V KS  ++ +K+KV  + ++ K L+P   
Sbjct: 288 VNRGRASTTSKASNILVDYRTNNSRKEGKRIVAKSTTKDAVKSKVVCQTINRKGLVPL-- 345

Query: 427 RTLGSDSL-IASRTKGKVQVSEQRKRCPSSGKENGLETMTTRKNSLAR 287
           R    D L  A++ K KV V     R    GKEN    +   + S  R
Sbjct: 346 RVNEQDPLTAATKAKSKVGVGAS-NRLAGGGKENASGKLAVSQKSSGR 392


>ref|XP_002316934.1| cyclic nucleotide-gated channel [Populus trichocarpa]
           gi|222859999|gb|EEE97546.1| cyclic nucleotide-gated
           channel [Populus trichocarpa]
          Length = 565

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
 Frame = -1

Query: 700 PGHDGNNMTSRGTLHNDKTPDSRNAMGIYQAPKNILKGPNLSKASPVVQKICSGPRQKIE 521
           PGHD  + T     + ++TPDSRN   + +A +   K  N+SK S V  K     R+   
Sbjct: 266 PGHDVKSSTITLMRNKEQTPDSRNVARMTEAARKKKKDSNMSKTSDVRVKEVFNSRKGAI 325

Query: 520 TAVRKSINQETLKAKVQSRPVHPKVLLPQSERTLGSDSLI-ASRTKGKVQVSEQRKRCPS 344
           + V KS  QE LK+KVQ + +  +V      R     SL   +++K KV+VS   K   +
Sbjct: 326 SNVSKSAPQEALKSKVQKQTI--RVTALAEHRGNKQHSLPGTAKSKEKVRVSRLNKMV-A 382

Query: 343 SGKENGLETMTTRKNSLARG 284
            GKEN +  M+  +N   RG
Sbjct: 383 PGKENVMGKMSLSQNCSRRG 402


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