BLASTX nr result

ID: Cnidium21_contig00037136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037136
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19224.3| unnamed protein product [Vitis vinifera]              209   1e-52
ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-52
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   198   4e-49
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi...   190   9e-47

>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  209 bits (533), Expect = 1e-52
 Identities = 105/142 (73%), Positives = 120/142 (84%)
 Frame = +2

Query: 2   RQVGVGWSTLATLANIYLKAGLLDKATLAVKAAEKKLSAVNRLGYLFLMTIYTSLNNKDT 181
           + V VGWSTL+TLANIYLK+GL+ KA LA+K AEKKLSA NRLGY FL+T+Y SL+NK+ 
Sbjct: 239 KNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEE 298

Query: 182 VLRLWEACKKVDGRITCTNYMTIISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLG 361
           VLRLWEA KKV GRIT TNYM I+  LVKLGDI EAE IF EWES+C KYDIRVSN+LLG
Sbjct: 299 VLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLG 358

Query: 362 AYIRNGSTEKAEALHLRTLERG 427
           AY+R GS +KAE+LHL TLERG
Sbjct: 359 AYMRTGSMDKAESLHLHTLERG 380


>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  209 bits (533), Expect = 1e-52
 Identities = 105/142 (73%), Positives = 120/142 (84%)
 Frame = +2

Query: 2   RQVGVGWSTLATLANIYLKAGLLDKATLAVKAAEKKLSAVNRLGYLFLMTIYTSLNNKDT 181
           + V VGWSTL+TLANIYLK+GL+ KA LA+K AEKKLSA NRLGY FL+T+Y SL+NK+ 
Sbjct: 212 KNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEE 271

Query: 182 VLRLWEACKKVDGRITCTNYMTIISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLG 361
           VLRLWEA KKV GRIT TNYM I+  LVKLGDI EAE IF EWES+C KYDIRVSN+LLG
Sbjct: 272 VLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLG 331

Query: 362 AYIRNGSTEKAEALHLRTLERG 427
           AY+R GS +KAE+LHL TLERG
Sbjct: 332 AYMRTGSMDKAESLHLHTLERG 353


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  198 bits (503), Expect = 4e-49
 Identities = 96/140 (68%), Positives = 114/140 (81%)
 Frame = +2

Query: 8   VGVGWSTLATLANIYLKAGLLDKATLAVKAAEKKLSAVNRLGYLFLMTIYTSLNNKDTVL 187
           V VGWSTLATLANIY KAG++DKA LA+K AEK LS  + LGY FLMT Y+SL NK+ V 
Sbjct: 233 VEVGWSTLATLANIYTKAGIVDKALLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQ 292

Query: 188 RLWEACKKVDGRITCTNYMTIISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAY 367
           RLWEACK V+GRITC NYM ++S LVK+GD+ EAE++F +WE  CRKYDIRVSN+LLGAY
Sbjct: 293 RLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAY 352

Query: 368 IRNGSTEKAEALHLRTLERG 427
           +R G   KAE+LHL TL+RG
Sbjct: 353 VRKGLMNKAESLHLHTLDRG 372


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/140 (65%), Positives = 112/140 (80%)
 Frame = +2

Query: 8   VGVGWSTLATLANIYLKAGLLDKATLAVKAAEKKLSAVNRLGYLFLMTIYTSLNNKDTVL 187
           VGVGWSTLA+LAN+Y+KAG +DKA L +K AE KLS   RLGY FL+T+Y+SL NK+ VL
Sbjct: 249 VGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVL 308

Query: 188 RLWEACKKVDGRITCTNYMTIISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLGAY 367
           RLWEA K V GRI C +YM +IS LVK+GD+  AE++F EWE+ C KYDIRVSN+LLGAY
Sbjct: 309 RLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAY 368

Query: 368 IRNGSTEKAEALHLRTLERG 427
           +RNG   KAE+ HL T+ERG
Sbjct: 369 VRNGLMGKAESFHLHTVERG 388


>ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 530

 Score =  190 bits (483), Expect = 9e-47
 Identities = 94/142 (66%), Positives = 111/142 (78%)
 Frame = +2

Query: 2   RQVGVGWSTLATLANIYLKAGLLDKATLAVKAAEKKLSAVNRLGYLFLMTIYTSLNNKDT 181
           R V VGWS+LATLAN Y KAG   KA L +K AE+KLS  NRLGY FL+T+Y SL  K+ 
Sbjct: 258 RNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLYASLKEKEG 317

Query: 182 VLRLWEACKKVDGRITCTNYMTIISSLVKLGDIHEAEEIFTEWESQCRKYDIRVSNILLG 361
           VLRLWEA K V GRI+C NY+ I+  LVKLGDI +A+ IF EWES C+KYDIRVSN+LLG
Sbjct: 318 VLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLG 377

Query: 362 AYIRNGSTEKAEALHLRTLERG 427
           AY RNGS E+AE+LHL TL++G
Sbjct: 378 AYARNGSMEEAESLHLHTLQKG 399


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