BLASTX nr result

ID: Cnidium21_contig00037101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037101
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa] gi|222...    85   7e-15
gb|EEC79309.1| hypothetical protein OsI_20143 [Oryza sativa Indi...    84   1e-14
gb|EEE63898.1| hypothetical protein OsJ_18723 [Oryza sativa Japo...    83   2e-14
gb|ACL80319.1| DNA glycosylase/lyase 701 [Oryza sativa Japonica ...    83   2e-14
ref|NP_001055685.1| Os05g0445900 [Oryza sativa Japonica Group] g...    83   2e-14

>ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa] gi|222865557|gb|EEF02688.1|
           DNA glycosylase [Populus trichocarpa]
          Length = 519

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 53/117 (45%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
 Frame = -1

Query: 339 DLNDCPESDDDIPTIRLDDEAYDN--QNEAETST--QQGNMSHTLAIPSVPSSTPIPNYR 172
           D+ D  E  D+IPTI+L+ E +    QN   T+   Q+G+MS  L   +  +S P P  +
Sbjct: 258 DIEDFGEDPDEIPTIKLNMEEFTENLQNYMHTNLELQEGDMSKALVALNPNASIPTPKLK 317

Query: 171 G--RLKSVHQVYLLPDSHPLLV-ELRVDEREPDDPSPYLFAPWAIREEGSTTRSSFP 10
              RL++ HQVY LPDSHPLL   L++D REPDDPSPYL A W     G T  S  P
Sbjct: 318 NVSRLRTEHQVYELPDSHPLLEGNLQMDRREPDDPSPYLLAIWT---PGETANSIEP 371


>gb|EEC79309.1| hypothetical protein OsI_20143 [Oryza sativa Indica Group]
          Length = 1873

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
 Frame = -1

Query: 339  DLNDCPESDDDIPTIRLDDEAYDNQ-----NEAETSTQQGNMSHTL-AIPSVPSSTPIPN 178
            D+ D  E  D+IPTI+L+ EA+         E+    Q  +++  L AI +  +S P+P 
Sbjct: 1606 DIEDFDEDTDEIPTIKLNMEAFSQNLENCIKESNKDFQSDDITKALVAISNEAASIPVPK 1665

Query: 177  YRG--RLKSVHQVYLLPDSHPLLVELRVDEREPDDPSPYLFAPWAIREEGSTTRSSFP 10
             +   RL++ H VY LPDSHPL+ +L +++REPDDPSPYL A W   E   T  +  P
Sbjct: 1666 LKNVHRLRTEHYVYELPDSHPLMQQLALEQREPDDPSPYLLAIWTPDELKDTREAPKP 1723


>gb|EEE63898.1| hypothetical protein OsJ_18723 [Oryza sativa Japonica Group]
          Length = 1857

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
 Frame = -1

Query: 339  DLNDCPESDDDIPTIRLDDEAYDNQ-----NEAETSTQQGNMSHTL-AIPSVPSSTPIPN 178
            D+ D  E  D+IP I+L+ EA+         E+    Q  +++  L AI +  +S P+P 
Sbjct: 1590 DIEDFDEDTDEIPIIKLNMEAFSQNLENCIKESNKDFQSDDITKALVAISNEAASIPVPK 1649

Query: 177  YRG--RLKSVHQVYLLPDSHPLLVELRVDEREPDDPSPYLFAPWAIREEGSTTRSSFP 10
             +   RL++ H VY LPDSHPL+ +L +D+REPDDPSPYL A W   E   T  +  P
Sbjct: 1650 LKNVHRLRTEHYVYELPDSHPLMQQLALDQREPDDPSPYLLAIWTPDELKDTREAPKP 1707


>gb|ACL80319.1| DNA glycosylase/lyase 701 [Oryza sativa Japonica Group]
          Length = 1812

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
 Frame = -1

Query: 339  DLNDCPESDDDIPTIRLDDEAYDNQ-----NEAETSTQQGNMSHTL-AIPSVPSSTPIPN 178
            D+ D  E  D+IP I+L+ EA+         E+    Q  +++  L AI +  +S P+P 
Sbjct: 1545 DIEDFDEDTDEIPIIKLNMEAFSQNLENCIKESNKDFQSDDITKALVAISNEAASIPVPK 1604

Query: 177  YRG--RLKSVHQVYLLPDSHPLLVELRVDEREPDDPSPYLFAPWAIREEGSTTRSSFP 10
             +   RL++ H VY LPDSHPL+ +L +D+REPDDPSPYL A W   E   T  +  P
Sbjct: 1605 LKNVHRLRTEHYVYELPDSHPLMQQLALDQREPDDPSPYLLAIWTPDELKDTREAPKP 1662


>ref|NP_001055685.1| Os05g0445900 [Oryza sativa Japonica Group]
           gi|113579236|dbj|BAF17599.1| Os05g0445900, partial
           [Oryza sativa Japonica Group]
          Length = 473

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
 Frame = -1

Query: 339 DLNDCPESDDDIPTIRLDDEAYDNQ-----NEAETSTQQGNMSHTL-AIPSVPSSTPIPN 178
           D+ D  E  D+IP I+L+ EA+         E+    Q  +++  L AI +  +S P+P 
Sbjct: 206 DIEDFDEDTDEIPIIKLNMEAFSQNLENCIKESNKDFQSDDITKALVAISNEAASIPVPK 265

Query: 177 YRG--RLKSVHQVYLLPDSHPLLVELRVDEREPDDPSPYLFAPWAIREEGSTTRSSFP 10
            +   RL++ H VY LPDSHPL+ +L +D+REPDDPSPYL A W   E   T  +  P
Sbjct: 266 LKNVHRLRTEHYVYELPDSHPLMQQLALDQREPDDPSPYLLAIWTPDELKDTREAPKP 323


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