BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037092
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]                        62   2e-09
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    58   4e-08
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    60   1e-07
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    54   3e-07
dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana] g...    59   4e-07

>gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]
          Length = 348

 Score = 62.0 bits (149), Expect(2) = 2e-09
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
 Frame = +2

Query: 152 GLDET-YGAQRSQILMMTTLPSVKTACSYLEQEEAQREVLGQVKEESEGLAMFSKGNVGI 328
           GLDE+ YGA +S +L    LPS++ A + L Q+E  + +     E ++G++        +
Sbjct: 189 GLDESMYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSRLHDERNDGVSF------AV 242

Query: 329 SANAQTSSLTQ-------CGACGKIGHATDKCWTIVGFPSWLTR 439
               +T SLT+       C  CG++GH  + C+ +VG+P WL R
Sbjct: 243 QTTPRTRSLTKNKDSAIVCSHCGRLGHLAENCFKLVGYPPWLKR 286



 Score = 25.0 bits (53), Expect(2) = 2e-09
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 108 LHQQREEQKLFQFLMALMKRM 170
           + ++REE KL QFLM L + M
Sbjct: 174 VRKEREEDKLHQFLMGLDESM 194


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 57.8 bits (138), Expect(2) = 4e-08
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = +2

Query: 152 GLDET-YGAQRSQILMMTTLPSVKTACSYLEQEEAQREVLGQVKEESEGLAMFSKGNVGI 328
           GLDE+ YGA +S +L    LPS++ A + L Q+E  + +     E  +G++   +     
Sbjct: 190 GLDESVYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRLHNERVDGVSFAVQTT--- 246

Query: 329 SANAQTSSLTQCGACGKIGHATDKCWTIVGFPSWL 433
           S    +S    C  CG++GH  ++C+ ++G+P WL
Sbjct: 247 SRPRDSSENRVCSNCGRVGHLAEQCFKLIGYPPWL 281



 Score = 24.3 bits (51), Expect(2) = 4e-08
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 108 LHQQREEQKLFQFLMAL 158
           + ++REE KL QFLM L
Sbjct: 175 VRKEREEDKLHQFLMGL 191


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
 Frame = +2

Query: 152 GLDETYGAQRSQILMMTTLPSVKTACSYLEQEEAQREVLGQVKEESEGLAMFSKGNVGIS 331
           GL ++Y A RSQ+L+ + LPS+    S L QEE+QR +   V    +  AM ++ +    
Sbjct: 174 GLHDSYSAIRSQLLLQSPLPSMSRVFSLLLQEESQRSLTNAVGISIDSQAMVAEQSSRTV 233

Query: 332 ANAQTSSLTQ-------CGACGKIGHATDKCWTIVGFP 424
           + + T    Q       C  CG  GH  DKC+ ++G+P
Sbjct: 234 STSNTQFTKQKGKSDAICSHCGYSGHLVDKCFQLIGYP 271


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 54.3 bits (129), Expect(2) = 3e-07
 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +2

Query: 152 GLDETYGAQRSQILMMTTLPSVKTACSYLEQEEAQREVLGQVKEE-SEGLAMFSKGNVGI 328
           GL+E+Y A RS ILMM+ LP+V+ A S + QEE QR+V  +  E  S   A+  KG    
Sbjct: 473 GLNESYKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEPTENFSIAAAVPGKGG--- 529

Query: 329 SANAQTSSLTQCGACGKIGHATDKCWTI 412
                      C  C + GH  D+C T+
Sbjct: 530 -----NPRQKMCDHCNRSGHTIDECRTL 552



 Score = 24.6 bits (52), Expect(2) = 3e-07
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 114 QQREEQKLFQFLMAL 158
           +QREE +L QFLM L
Sbjct: 460 EQREEDRLMQFLMGL 474


>dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana]
           gi|26450382|dbj|BAC42306.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|28973203|gb|AAO63926.1| unknown protein [Arabidopsis
           thaliana]
          Length = 357

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
 Frame = +2

Query: 113 STEGRTKIVPISDGLDETYGAQRSQILMMTTLPSVKTACSYLEQEEAQREVLGQVKEESE 292
           S    +KIV    GL++ Y   RSQI+M  T+P +    + L+Q+ +QR ++      S 
Sbjct: 225 SVNEHSKIVKFLAGLNDFYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNIVTNPTNASA 284

Query: 293 -GLAMFSKGNVGISA----NAQTSSLTQCGACGKIGHATDKCWTIVGFP 424
             +++ S   + ++A       +    QC  CG  GH  D C+ I G+P
Sbjct: 285 FNVSILSNDQIAVNATRSFQPNSKPKVQCSHCGYTGHTADTCYKIHGYP 333