BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037090
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   216   1e-53
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   204   4e-50
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   204   5e-50
gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus v...   194   4e-47
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   193   9e-47

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  216 bits (551), Expect = 1e-53
 Identities = 123/401 (30%), Positives = 216/401 (53%), Gaps = 13/401 (3%)
 Frame = -2

Query: 1461 DPSSVYYIHPSDATTNQLVSTKFNGTGYANWKRSMMLTLSAKNKLAFVNGTITEPASDST 1282
            D +  YY+  SDA    L++T F+G+ Y NWKR ++++LSAKNKL F+ G   +P  +  
Sbjct: 32   DINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDL 91

Query: 1281 EYAVWNRCNDLVTSWILFNLEENVARSVLFLKSARSIWKDLEDRFGYVSMTQAYSLEQKL 1102
             +  W RC+D+V +W+L +L + +A SVL+ ++A+ +W++LE R+G +  T+ + L+++L
Sbjct: 92   LFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKMFQLQREL 151

Query: 1101 SEITQGKLSVSEFYTNIRALWDNLDDVDPMPQCKCTNCTCELSTKVQKKLQEHRLLQFLM 922
            + ++QG   V+ ++  ++ +WD +  ++    C C  C CE      K  ++ +L+QFLM
Sbjct: 152  NNVSQGTNDVAAYFNKLKRIWDQMKVLNTFMVCSC-ECNCEAKGHNAKMQEDQQLIQFLM 210

Query: 921  KLNDHYSAVRGHILLMDPSPSVAQAYRLVSQEENHKEMS--NVIPTENMAFVADKRSGRF 748
             LN+ YS +RG+IL+M P PS AQAY ++S EE  + ++  N + T++ AF A  ++   
Sbjct: 211  GLNEVYSGIRGNILMMKPLPSTAQAYSIISHEETQRGIAAGNNVSTDSAAFNASTQN--- 267

Query: 747  GDYIXXXXXXXXXXXXXXXGIAGSYANTGNFVNTGNAASAGNRKPKPGSNYYCTHCKTPG 568
                                   +Y N     N  N  +    +    +N YCT+C+T G
Sbjct: 268  -----------------WNNQRNNYDNRARNQNYNNRRNNYEGRRSNQNNSYCTYCRTSG 310

Query: 567  HNIDRCFKIHG------YPAGFKHRDTRVNKVAAAVSYNHSEDDFSDSQNANATKV---- 418
            H  + C K++G       PAG  + +T+ N   AA   N  + + +  +N +A  V    
Sbjct: 311  HVREECRKLNGRDNRNRRPAG--NPNTQAN---AAYEGNTMQRNGNTPENTSAGSVNAQG 365

Query: 417  FSADQYNALLNLL-SNQKLSDTGSTNNILDTSQAHLAGPFS 298
            F+ +Q   L+ +L S   +S T S + + + S A+  G ++
Sbjct: 366  FTKEQCEQLIQMLQSAHSISSTASCSEV-NNSAANFVGKYA 405


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  204 bits (520), Expect = 4e-50
 Identities = 95/315 (30%), Positives = 168/315 (53%), Gaps = 1/315 (0%)
 Frame = -2

Query: 1446 YYIHPSDATTNQLVSTKFN-GTGYANWKRSMMLTLSAKNKLAFVNGTITEPASDSTEYAV 1270
            YY+H +D     LVS +    + + +W+RS+++ L+ +NKL F+NGTIT+P  D  ++  
Sbjct: 34   YYLHSADHAGLILVSDRLTTASDFHSWRRSILMALNVRNKLGFINGTITKPPEDHRDFGA 93

Query: 1269 WNRCNDLVTSWILFNLEENVARSVLFLKSARSIWKDLEDRFGYVSMTQAYSLEQKLSEIT 1090
            W+RCND+V++W++ ++++ + +S+L++ + + IW +L  RF      + + +EQKLS+I 
Sbjct: 94   WSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIE 153

Query: 1089 QGKLSVSEFYTNIRALWDNLDDVDPMPQCKCTNCTCELSTKVQKKLQEHRLLQFLMKLND 910
            QG + +S +YT +  LW+   +   +P C C  C C+ + K +   Q  R+ +FL +LN+
Sbjct: 154  QGSMDISTYYTALLTLWEEHRNYVELPVCTCGRCECDAAVKWEHLQQRSRVTKFLKELNE 213

Query: 909  HYSAVRGHILLMDPSPSVAQAYRLVSQEENHKEMSNVIPTENMAFVADKRSGRFGDYIXX 730
             +   R HIL++ P P++ +A+ +V+Q+E  + +  +   +++AF               
Sbjct: 214  GFDQTRRHILMLKPIPTIKEAFNMVTQDERQRNVKPLTRVDSVAF--------------- 258

Query: 729  XXXXXXXXXXXXXGIAGSYANTGNFVNTGNAASAGNRKPKPGSNYYCTHCKTPGHNIDRC 550
                                NT       NA  A     +P     CTHC   GH I +C
Sbjct: 259  -------------------QNTSMINEDENAYVAAYNTVRPNQKPICTHCGKVGHTIQKC 299

Query: 549  FKIHGYPAGFKHRDT 505
            +K+HGYP G K  +T
Sbjct: 300  YKVHGYPPGMKTGNT 314


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  204 bits (519), Expect = 5e-50
 Identities = 106/318 (33%), Positives = 173/318 (54%), Gaps = 1/318 (0%)
 Frame = -2

Query: 1452 SVYYIHPSDATTNQLVSTKFNGTGYANWKRSMMLTLSAKNKLAFVNGTITEPASDSTEYA 1273
            S + +   D+  N LVS   +GT +++WK +M ++L AKNK+AFV+GT+  P      + 
Sbjct: 62   SPFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFR 121

Query: 1272 VWNRCNDLVTSWILFNLEENVARSVLFLKSARSIWKDLEDRFGYVSMTQAYSLEQKLSEI 1093
            VW+RCN +V SWIL ++ + + +S+L    A  IWKDL+ RF   ++ ++Y L Q++  +
Sbjct: 122  VWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSL 181

Query: 1092 TQGKLSVSEFYTNIRALWDNLDDVDPMPQCKCTNCTCELSTKVQKKLQEHRLLQFLMKLN 913
             QG +S+S++YT ++ LWD+LD    +  CK  NCTC ++T     ++  ++++FL  LN
Sbjct: 182  QQGTMSLSDYYTALKTLWDDLDGASCVSTCK--NCTCCIAT--ASMIEHSKIVKFLSGLN 237

Query: 912  DHYSAVRGHILLMDPSPSVAQAYRLVSQEENHKEMSNVIPTENMAF-VADKRSGRFGDYI 736
            + YS +R  I++    P +A+ Y L+ Q+ + + +   +PT    F V+  +S +F    
Sbjct: 238  ESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNIV-TMPTNASTFNVSAPQSDQF---- 292

Query: 735  XXXXXXXXXXXXXXXGIAGSYANTGNFVNTGNAASAGNRKPKPGSNYYCTHCKTPGHNID 556
                                           N A +   +PKP     C+HC   GHN D
Sbjct: 293  -----------------------------AVNLAKSFGTQPKP--KVQCSHCGYTGHNAD 321

Query: 555  RCFKIHGYPAGFKHRDTR 502
             C+KIHGYP GFKH+D +
Sbjct: 322  TCYKIHGYPVGFKHKDKK 339


>gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
          Length = 1009

 Score =  194 bits (494), Expect = 4e-47
 Identities = 110/390 (28%), Positives = 191/390 (48%), Gaps = 5/390 (1%)
 Frame = -2

Query: 1443 YIHPSDATTNQLVSTKFNGTGYANWKRSMMLTLSAKNKLAFVNGTITEPASDSTEYAVWN 1264
            Y+HPS+     LVS   + T Y +W +S++  LSAKNK+ FV GT   P  +   Y+ W+
Sbjct: 231  YLHPSENPAVPLVSPALDSTNYHSWSKSIITALSAKNKVEFVLGTCPCPLKNHPTYSAWH 290

Query: 1263 RCNDLVTSWILFNLEENVARSVLFLKSARSIWKDLEDRFGYVSMTQAYSLEQKLSEITQG 1084
            RCN++V SW++ ++   + +S++++  A  IW DL+ R+    +++   L+  ++ + QG
Sbjct: 291  RCNNMVVSWLVHSVSIPIRQSIVWMDIALDIWNDLKSRYSSGDLSRISDLQLGVASLHQG 350

Query: 1083 KLSVSEFYTNIRALWDNLDDVDPMPQCKC-TNCTC--ELSTKVQKKLQEHRLLQFLMKLN 913
            +L+V++++T +R +WD L++  P P C C T C+C    ++ + ++  E + +QFL  LN
Sbjct: 351  ELTVTDYFTKLRIIWDELENFRPNPVCICETKCSCFVAFTSLINQRKCEDQAMQFLRGLN 410

Query: 912  DHYSAVRGHILLMDPSPSVAQAYRLVSQEENHKEMSNVIPTENMAFVADKRSGRFGDYIX 733
            + Y  ++ H+LLM+P P + + + LV Q+E  +++ N     N   +    S R    + 
Sbjct: 411  EQYLNIKFHVLLMEPIPPITKKFSLVVQQE--RQLDNNFSVSN---INSANSNRISSSV- 464

Query: 732  XXXXXXXXXXXXXXGIAGSYANTGN--FVNTGNAASAGNRKPKPGSNYYCTHCKTPGHNI 559
                             G   +T N  F   G            G+   CTHC   GH I
Sbjct: 465  ------------ICTFCGKNGHTENVCFRKVGFPNQENKSFKNNGNKKMCTHCGRNGHTI 512

Query: 558  DRCFKIHGYPAGFKHRDTRVNKVAAAVSYNHSEDDFSDSQNANATKVFSADQYNALLNLL 379
            + C+K HGYP G+K   ++ N+V   V  ++   +    +        +A QY  L +L 
Sbjct: 513  ETCYKKHGYPPGYKFYGSKTNQVNNIVISDYVLSEPCQKEQEKGEYHLTAQQYQVLSDLF 572

Query: 378  SNQKLSDTGSTNNILDTSQAHLAGPFSERT 289
                     + NN     Q +  G F+  T
Sbjct: 573  RQ------STNNNTAANIQVNRVGSFTADT 596


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  193 bits (491), Expect = 9e-47
 Identities = 122/389 (31%), Positives = 193/389 (49%), Gaps = 14/389 (3%)
 Frame = -2

Query: 1461 DPSSVYYIHPSDATTNQLVSTKFNGTGYANWKRSMMLTLSAKNKLAFVNGTITEPAS--D 1288
            D S+ Y+ H SD     L+S   NG  Y+ WKR+M+L L++KNKL FVNG+I  P+   D
Sbjct: 14   DLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKAPSEEID 73

Query: 1287 STEYAVWNRCNDLVTSWILFNLEENVARSVLFLKSARSIWKDLEDRFGYVSMTQAYSLEQ 1108
               YA W+RCND+V SWI+  L   +A SV++  +A  +W+DL +RF   +  + + +++
Sbjct: 74   PEGYATWSRCNDMVHSWIVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQR 133

Query: 1107 KLSEITQGKLSVSEFYTNIRALWDNLDDVDPMPQCKCTNCTCELSTKVQKKLQEHRLLQF 928
             ++ + Q +LSVS +YT ++ LWD L            N     + + Q+K     L+QF
Sbjct: 134  DIACLRQEQLSVSAYYTKLKGLWDELASY---------NAAAHGAQQDQQK-----LMQF 179

Query: 927  LMKLNDHYSAVRGHILLMDPSPSVAQAYRLVSQEENHKEMSNVIPTENMAFVADKRSGRF 748
            LM LN+ YS +RG ILLM+P PSV QAY  +SQEE  + +++       A  A       
Sbjct: 180  LMGLNESYSVIRGQILLMNPLPSVRQAYSTISQEEKQRLLTSTNAAAESAASAAMAVRSN 239

Query: 747  GDYIXXXXXXXXXXXXXXXGIAGSYANTGNFVNTGNAASAGNR------KPKPGSNY--- 595
            G  +                     + + NF+   ++     R      + + GS     
Sbjct: 240  GKSLTTWKDGIDRSNTRRMEPTNRPSGSQNFLENRSSQGQDGRPFFDQDRRRIGSGRGRP 299

Query: 594  YCTHCKTPGHNIDRCFKIHGYPAGFKHRDTRVNKVAAAVSYNHS---EDDFSDSQNANAT 424
             C++C   GH + +CF++HGYP    H   R+N + +  + N S    +  S++      
Sbjct: 300  QCSYCGDMGHWVQKCFQLHGYPP--DHPKARMN-LGSNSNRNKSFSATNQVSEADEGKPA 356

Query: 423  KVFSADQYNALLNLLSNQKLSDTGSTNNI 337
               S  Q   LL+LL+NQ  + +   N +
Sbjct: 357  VALSEAQLKQLLSLLNNQDENSSSKVNAV 385