BLASTX nr result

ID: Cnidium21_contig00037089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037089
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   119   2e-25
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   109   2e-22
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   103   2e-20
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   102   4e-20

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/74 (71%), Positives = 59/74 (79%)
 Frame = -3

Query: 224 YFSCMLQPCRTDSDPNYTGIRRLLLSRKPHPSLLRRKDWRCNGKGYVAFRNYINRPRNWE 45
           +FSC+LQP   DSDP Y GIRRLLL RK    + RRKDWRCNGKGYVA+RNYI RPRNWE
Sbjct: 24  FFSCLLQPSSADSDPQYIGIRRLLLRRKAESGVHRRKDWRCNGKGYVAYRNYIRRPRNWE 83

Query: 44  NMHIASHSSTHGQS 3
           ++H  SHSST GQS
Sbjct: 84  SLHAPSHSSTPGQS 97


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/81 (62%), Positives = 58/81 (71%)
 Frame = -3

Query: 245 ENCLPEEYFSCMLQPCRTDSDPNYTGIRRLLLSRKPHPSLLRRKDWRCNGKGYVAFRNYI 66
           +N +  E FSC+LQP  TDSDP Y GIRRLLL RK    + RR DWRCNGKGYV++RNYI
Sbjct: 35  KNKVDPELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWRCNGKGYVSYRNYI 94

Query: 65  NRPRNWENMHIASHSSTHGQS 3
            RPRNWEN  I S  +T G S
Sbjct: 95  RRPRNWENQQIPSLQTTPGDS 115


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/75 (62%), Positives = 54/75 (72%)
 Frame = -3

Query: 227 EYFSCMLQPCRTDSDPNYTGIRRLLLSRKPHPSLLRRKDWRCNGKGYVAFRNYINRPRNW 48
           E  SC+LQP     DP+Y GIRRLLL RK   ++ RRKDWRCNGKGYVAFRN+I RPRNW
Sbjct: 40  ELLSCLLQPMSIGVDPDYIGIRRLLLYRKAEAAIFRRKDWRCNGKGYVAFRNFIRRPRNW 99

Query: 47  ENMHIASHSSTHGQS 3
           E+  + S  ST G S
Sbjct: 100 ESSRLPSLQSTPGNS 114


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/75 (62%), Positives = 55/75 (73%)
 Frame = -3

Query: 227 EYFSCMLQPCRTDSDPNYTGIRRLLLSRKPHPSLLRRKDWRCNGKGYVAFRNYINRPRNW 48
           E FSC+LQP  +DSDP+Y GIRRLLL RK    + RR DWRCNGKGY ++RNYI RPRNW
Sbjct: 49  ELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGYTSYRNYIRRPRNW 108

Query: 47  ENMHIASHSSTHGQS 3
           +   + SH ST G S
Sbjct: 109 DG--LPSHQSTPGNS 121


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 EYFSCMLQPCRTDSDPNYTGIRRLLLSRKPHPSLLRRKDWRCNGKGYVAFRNYINRPRNW 48
           E F C+LQP  TD DP Y GIRRLLL RK    +LRR+DWRCNGK YVA+RNYI+RPRNW
Sbjct: 51  ELFCCLLQPATTDGDPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVAYRNYISRPRNW 110

Query: 47  E--NMHIASHSSTHGQS 3
           E  ++   S  ST G S
Sbjct: 111 ERDSLRTPSLQSTPGNS 127


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