BLASTX nr result

ID: Cnidium21_contig00037082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037082
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabac...   160   1e-37
ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulg...   139   2e-31

>ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabacum]
           gi|56806655|dbj|BAD83556.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 109

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/85 (90%), Positives = 79/85 (92%)
 Frame = -1

Query: 343 PSSPLAV*AGCPSLLRSVRLWITGTNVIEWNSRRVTRSTVPRCEVQVVMITPGYALAPLT 164
           PSSPLAV AGCPSLLRS +LWI GTNV+EWNSRRVTRSTVPRCEVQVVMITPGYALAPLT
Sbjct: 25  PSSPLAVWAGCPSLLRSFKLWIKGTNVVEWNSRRVTRSTVPRCEVQVVMITPGYALAPLT 84

Query: 163 GTPEPANARENPGRPALHSSDRRCG 89
           GTPEPANARENPGR  LHSSDRR G
Sbjct: 85  GTPEPANARENPGRSVLHSSDRRYG 109


>ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulgaris subsp. maritima]
           gi|346683127|ref|YP_004842056.1| hypothetical protein
           BemaM_p008 [Beta macrocarpa]
           gi|317905687|emb|CBX33234.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439767|emb|CBX33286.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320147999|emb|CBJ20665.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500045|emb|CBX24861.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939224|emb|CBL52070.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 145

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/73 (90%), Positives = 70/73 (95%)
 Frame = -1

Query: 343 PSSPLAV*AGCPSLLRSVRLWITGTNVIEWNSRRVTRSTVPRCEVQVVMITPGYALAPLT 164
           PSSPLAV AGCPSLLRSVRLWI GTNV++W+S+RVTRSTVPRCEVQVVMITPGYALAPLT
Sbjct: 40  PSSPLAVWAGCPSLLRSVRLWIRGTNVVKWDSKRVTRSTVPRCEVQVVMITPGYALAPLT 99

Query: 163 GTPEPANARENPG 125
           GTP PANARENPG
Sbjct: 100 GTPGPANARENPG 112


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