BLASTX nr result

ID: Cnidium21_contig00037070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037070
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis...   243   2e-62
ref|XP_004171804.1| PREDICTED: transcription elongation factor S...   241   4e-62
ref|XP_004152869.1| PREDICTED: transcription elongation factor S...   241   4e-62
ref|XP_003521098.1| PREDICTED: transcription elongation factor S...   239   2e-61
ref|XP_003553378.1| PREDICTED: transcription elongation factor S...   238   4e-61

>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
            gi|223536178|gb|EEF37832.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1650

 Score =  243 bits (619), Expect = 2e-62
 Identities = 123/180 (68%), Positives = 146/180 (81%)
 Frame = +2

Query: 2    RKAASLMRSLVRSGAIFTRKDLLTEHGIGKKVFINSVGFLRVRRNGMAASSNQFIDLLDD 181
            RKAASL RSLVR+GAIFTRKD +T HG+GKKVF+N+VGFLRVRR+G+AASS+QFIDLLDD
Sbjct: 960  RKAASLQRSLVRAGAIFTRKDFVTVHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD 1019

Query: 182  TRIHPESYGLAQELAKDVYLXXXXXXXXXXXXXVLQMAIEHVREKPHLLKSLEVHEYAKS 361
            TRIHPESYGLAQE+AKDVY               L+MAIEHVR++P+LLKSL++ EY + 
Sbjct: 1020 TRIHPESYGLAQEMAKDVY--EMDNGDGNDDDEALEMAIEHVRDRPNLLKSLDLDEYLQD 1077

Query: 362  KRSENKIQTLNLIRLELIHGFQDWRNPYAAPSQDEEFCMISGETEDSLAEGRSVQATIRR 541
            K+ ENK +T   ++ ELI GFQDWR  Y  P+QDEEF MISGETED+LAEGR VQAT+RR
Sbjct: 1078 KKRENKKETFKNVKGELIQGFQDWRKQYKEPTQDEEFYMISGETEDTLAEGRIVQATVRR 1137


>ref|XP_004171804.1| PREDICTED: transcription elongation factor SPT6-like, partial
            [Cucumis sativus]
          Length = 1322

 Score =  241 bits (616), Expect = 4e-62
 Identities = 123/180 (68%), Positives = 147/180 (81%)
 Frame = +2

Query: 2    RKAASLMRSLVRSGAIFTRKDLLTEHGIGKKVFINSVGFLRVRRNGMAASSNQFIDLLDD 181
            RKAASL RSLVR+G+IFTRKD +T HG+GKKVF+N+VGFLRVRR+G+AASS+QFIDLLDD
Sbjct: 940  RKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD 999

Query: 182  TRIHPESYGLAQELAKDVYLXXXXXXXXXXXXXVLQMAIEHVREKPHLLKSLEVHEYAKS 361
            TRIHPESY LAQELAKDV+                +MAIEHVR++PHLL++L+V EYAKS
Sbjct: 1000 TRIHPESYALAQELAKDVF--DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKS 1057

Query: 362  KRSENKIQTLNLIRLELIHGFQDWRNPYAAPSQDEEFCMISGETEDSLAEGRSVQATIRR 541
            K+ E+KI+T   I+ EL+ GFQDWR  Y  PSQDEEF MISGETED+LAEGR VQAT+R+
Sbjct: 1058 KKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRK 1117


>ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
            sativus]
          Length = 1631

 Score =  241 bits (616), Expect = 4e-62
 Identities = 123/180 (68%), Positives = 147/180 (81%)
 Frame = +2

Query: 2    RKAASLMRSLVRSGAIFTRKDLLTEHGIGKKVFINSVGFLRVRRNGMAASSNQFIDLLDD 181
            RKAASL RSLVR+G+IFTRKD +T HG+GKKVF+N+VGFLRVRR+G+AASS+QFIDLLDD
Sbjct: 940  RKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD 999

Query: 182  TRIHPESYGLAQELAKDVYLXXXXXXXXXXXXXVLQMAIEHVREKPHLLKSLEVHEYAKS 361
            TRIHPESY LAQELAKDV+                +MAIEHVR++PHLL++L+V EYAKS
Sbjct: 1000 TRIHPESYALAQELAKDVF--DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKS 1057

Query: 362  KRSENKIQTLNLIRLELIHGFQDWRNPYAAPSQDEEFCMISGETEDSLAEGRSVQATIRR 541
            K+ E+KI+T   I+ EL+ GFQDWR  Y  PSQDEEF MISGETED+LAEGR VQAT+R+
Sbjct: 1058 KKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRK 1117


>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1663

 Score =  239 bits (610), Expect = 2e-61
 Identities = 124/180 (68%), Positives = 143/180 (79%)
 Frame = +2

Query: 2    RKAASLMRSLVRSGAIFTRKDLLTEHGIGKKVFINSVGFLRVRRNGMAASSNQFIDLLDD 181
            RKAASL RSLVR+GAIFTRKD LTEH +GKKVF+N+VGFLRVRR+G+AASS+QFIDLLDD
Sbjct: 960  RKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD 1019

Query: 182  TRIHPESYGLAQELAKDVYLXXXXXXXXXXXXXVLQMAIEHVREKPHLLKSLEVHEYAKS 361
            TRIHPESY LAQELAKDVY               L+MAIEHVR++P  LK+L+V EYA  
Sbjct: 1020 TRIHPESYILAQELAKDVY-EEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYASG 1078

Query: 362  KRSENKIQTLNLIRLELIHGFQDWRNPYAAPSQDEEFCMISGETEDSLAEGRSVQATIRR 541
            K+ +NKIQT   I+ ELI GFQDWR  Y  PSQDEEF MISGETE++LAEG+ VQ T+RR
Sbjct: 1079 KKRQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRR 1138


>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1617

 Score =  238 bits (607), Expect = 4e-61
 Identities = 123/180 (68%), Positives = 143/180 (79%)
 Frame = +2

Query: 2    RKAASLMRSLVRSGAIFTRKDLLTEHGIGKKVFINSVGFLRVRRNGMAASSNQFIDLLDD 181
            RKAASL RSLVR+GAIFTRKD LTEH +GKKVF+N+VGFLRVRR+G+AASS+QFIDLLDD
Sbjct: 929  RKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD 988

Query: 182  TRIHPESYGLAQELAKDVYLXXXXXXXXXXXXXVLQMAIEHVREKPHLLKSLEVHEYAKS 361
            TRIHPESY LAQELAKDVY               L+MAIEHVR++P  LK+L+V +YA  
Sbjct: 989  TRIHPESYILAQELAKDVY-EEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEQYASG 1047

Query: 362  KRSENKIQTLNLIRLELIHGFQDWRNPYAAPSQDEEFCMISGETEDSLAEGRSVQATIRR 541
            K+ +NKIQT   I+ ELI GFQDWR  Y  PSQDEEF MISGETE++LAEG+ VQ T+RR
Sbjct: 1048 KKRQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRR 1107


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