BLASTX nr result

ID: Cnidium21_contig00037050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037050
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625415.1| WD repeat-containing protein [Medicago trunc...    64   1e-08
ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-l...    59   4e-07
ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_004152006.1| PREDICTED: WD repeat-containing protein 70-l...    56   4e-06
ref|XP_002526531.1| nucleotide binding protein, putative [Ricinu...    55   8e-06

>ref|XP_003625415.1| WD repeat-containing protein [Medicago truncatula]
           gi|355500430|gb|AES81633.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 611

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 176 EIYSGMRASFPISFGKQSKSQTPLETIHKSTLRSVDAS 63
           EIY G+RA FP+SFGKQSKSQTPLETIHK+T RSV  S
Sbjct: 6   EIYDGVRAEFPLSFGKQSKSQTPLETIHKATRRSVPTS 43


>ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-like [Glycine max]
          Length = 614

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/48 (56%), Positives = 33/48 (68%)
 Frame = -2

Query: 185 QDEEIYSGMRASFPISFGKQSKSQTPLETIHKSTLRSVDASKDVNPFP 42
           ++ +IY G+RA FP+SFGKQSK QTPLE IH +T RS    K  N  P
Sbjct: 3   EEGDIYDGVRAQFPLSFGKQSKPQTPLEAIHNATRRSNSNPKTANDLP 50


>ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|222861386|gb|EEE98928.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = -2

Query: 185 QDEEIYSGMRASFPISFGKQSKSQTPLETIHKSTLRSVDASKDVN 51
           ++ EIY G+RA FP++FGKQSKSQTPLE IH +T+R    +   N
Sbjct: 4   EEAEIYDGVRAQFPLTFGKQSKSQTPLEQIHNTTIRKAPPTSAAN 48


>ref|XP_004152006.1| PREDICTED: WD repeat-containing protein 70-like [Cucumis sativus]
           gi|449509056|ref|XP_004163480.1| PREDICTED: WD
           repeat-containing protein 70-like [Cucumis sativus]
          Length = 646

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -2

Query: 182 DEEIYSGMRASFPISFGKQSKSQTPLETIHKSTLRSVDAS 63
           + EIY G+RA FP++FGKQSK+QTPLE IH +T R+   S
Sbjct: 4   EAEIYDGIRAQFPLTFGKQSKAQTPLEAIHNTTRRNTSVS 43


>ref|XP_002526531.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223534092|gb|EEF35809.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 658

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -2

Query: 182 DEEIYSGMRASFPISFGKQSKSQTPLETIHKSTLR 78
           + +IY G+RA FP++FGKQSKSQTPLE IH ST R
Sbjct: 16  EADIYDGIRAHFPLTFGKQSKSQTPLEVIHNSTRR 50


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