BLASTX nr result

ID: Cnidium21_contig00037044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037044
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...    68   8e-26
ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    69   8e-24
ref|NP_568411.4| ubiquitin-specific protease 8 [Arabidopsis thal...    71   5e-23
emb|CAC34496.1| ubiquitin-specific protease-like protein [Arabid...    71   5e-23
sp|Q9C585.2|UBP8_ARATH RecName: Full=Ubiquitin carboxyl-terminal...    71   5e-23

>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 889

 Score = 68.2 bits (165), Expect(3) = 8e-26
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -3

Query: 168 DVCQGQYKSTLVCPLCRKSSIMFDPFMYVSLPLP 67
           D+CQGQYKSTLVCP+C+K S+ FDPFMY+SLPLP
Sbjct: 435 DICQGQYKSTLVCPICKKVSVTFDPFMYLSLPLP 468



 Score = 67.0 bits (162), Expect(3) = 8e-26
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -1

Query: 287 NGLHEVVNRVKTKPYVEVKDSDGCLDEEVADEYWQNYLA 171
           +GLHE +NRVK+KPYVE KD +G LDEEVADEYWQN++A
Sbjct: 389 DGLHEDLNRVKSKPYVEAKDGEGRLDEEVADEYWQNHVA 427



 Score = 26.9 bits (58), Expect(3) = 8e-26
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -2

Query: 64  ST*IRRLTLIIMTTDGSSQ 8
           ST IR +TL +++TDGSSQ
Sbjct: 469 STNIRTMTLTVVSTDGSSQ 487


>ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
           max]
          Length = 874

 Score = 69.3 bits (168), Expect(2) = 8e-24
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -3

Query: 168 DVCQGQYKSTLVCPLCRKSSIMFDPFMYVSLPLP 67
           DVCQGQYKSTLVCP+CRK S+ FDPFMY+SLPLP
Sbjct: 425 DVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLP 458



 Score = 65.9 bits (159), Expect(2) = 8e-24
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -1

Query: 287 NGLHEVVNRVKTKPYVEVKDSDGCLDEEVADEYWQNYLA 171
           +GLHE +NRVK KPY+EVKD DG  DEEVADEYW N+LA
Sbjct: 379 DGLHEDLNRVKCKPYIEVKDGDGRRDEEVADEYWHNHLA 417


>ref|NP_568411.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
           gi|240256327|ref|NP_851052.4| ubiquitin-specific
           protease 8 [Arabidopsis thaliana]
           gi|332005587|gb|AED92970.1| ubiquitin-specific protease
           8 [Arabidopsis thaliana] gi|332005588|gb|AED92971.1|
           ubiquitin-specific protease 8 [Arabidopsis thaliana]
          Length = 913

 Score = 70.9 bits (172), Expect(2) = 5e-23
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -3

Query: 168 DVCQGQYKSTLVCPLCRKSSIMFDPFMYVSLPLP 67
           DVCQGQYKSTLVCP+C+K S+MFDPFMY+SLPLP
Sbjct: 467 DVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLP 500



 Score = 61.6 bits (148), Expect(2) = 5e-23
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -1

Query: 287 NGLHEVVNRVKTKPYVEVKDSDGCLDEEVADEYWQNYLA 171
           +GLHE +NRVK KPYVE KD DG  D EVADEYW+N++A
Sbjct: 421 DGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVA 459


>emb|CAC34496.1| ubiquitin-specific protease-like protein [Arabidopsis thaliana]
          Length = 901

 Score = 70.9 bits (172), Expect(2) = 5e-23
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -3

Query: 168 DVCQGQYKSTLVCPLCRKSSIMFDPFMYVSLPLP 67
           DVCQGQYKSTLVCP+C+K S+MFDPFMY+SLPLP
Sbjct: 455 DVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLP 488



 Score = 61.6 bits (148), Expect(2) = 5e-23
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -1

Query: 287 NGLHEVVNRVKTKPYVEVKDSDGCLDEEVADEYWQNYLA 171
           +GLHE +NRVK KPYVE KD DG  D EVADEYW+N++A
Sbjct: 409 DGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVA 447


>sp|Q9C585.2|UBP8_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
           Full=Deubiquitinating enzyme 8; Short=AtUBP8; AltName:
           Full=Ubiquitin thioesterase 8; AltName:
           Full=Ubiquitin-specific-processing protease 8
          Length = 871

 Score = 70.9 bits (172), Expect(2) = 5e-23
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -3

Query: 168 DVCQGQYKSTLVCPLCRKSSIMFDPFMYVSLPLP 67
           DVCQGQYKSTLVCP+C+K S+MFDPFMY+SLPLP
Sbjct: 425 DVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLP 458



 Score = 61.6 bits (148), Expect(2) = 5e-23
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -1

Query: 287 NGLHEVVNRVKTKPYVEVKDSDGCLDEEVADEYWQNYLA 171
           +GLHE +NRVK KPYVE KD DG  D EVADEYW+N++A
Sbjct: 379 DGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVA 417


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