BLASTX nr result

ID: Cnidium21_contig00037027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00037027
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141134.1| PREDICTED: tubulin alpha-3 chain-like [Cucum...    74   3e-22
ref|XP_004170946.1| PREDICTED: LOW QUALITY PROTEIN: tubulin alph...    74   3e-22
gb|AGG37290.1| alpha-tubulin 8 [Salix arbutifolia]                     74   7e-22
ref|XP_003608582.1| Tubulin alpha-5 chain [Medicago truncatula] ...    73   1e-21
gb|AFC88824.1| putative tubulin alpha-3 chain [Miscanthus sinensis]    72   1e-21

>ref|XP_004141134.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus]
          Length = 449

 Score = 73.6 bits (179), Expect(2) = 3e-22
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = -3

Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103
           REIVD+CLDRVRKLADNCT LQGFLVFNAVGGGT SG
Sbjct: 112 REIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSG 148



 Score = 56.2 bits (134), Expect(2) = 3e-22
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -2

Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20
           +GSLLLERLSV+YGKKSKLGFSIYPSPQ
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFSIYPSPQ 176


>ref|XP_004170946.1| PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3 chain-like [Cucumis
           sativus]
          Length = 447

 Score = 73.6 bits (179), Expect(2) = 3e-22
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = -3

Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103
           REIVD+CLDRVRKLADNCT LQGFLVFNAVGGGT SG
Sbjct: 112 REIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSG 148



 Score = 56.2 bits (134), Expect(2) = 3e-22
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -2

Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20
           +GSLLLERLSV+YGKKSKLGFSIYPSPQ
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFSIYPSPQ 176


>gb|AGG37290.1| alpha-tubulin 8 [Salix arbutifolia]
          Length = 449

 Score = 73.6 bits (179), Expect(2) = 7e-22
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = -3

Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103
           REIVD+CLDRVRKLADNCT LQGFLVFNAVGGGT SG
Sbjct: 112 REIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSG 148



 Score = 55.1 bits (131), Expect(2) = 7e-22
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -2

Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20
           +GSLLLERLSV+YGKKSKLGF+IYPSPQ
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTIYPSPQ 176


>ref|XP_003608582.1| Tubulin alpha-5 chain [Medicago truncatula]
           gi|355509637|gb|AES90779.1| Tubulin alpha-5 chain
           [Medicago truncatula]
          Length = 451

 Score = 73.2 bits (178), Expect(2) = 1e-21
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -3

Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103
           +EIVDVCLDR+RKLADNCT LQGFLVFNAVGGGT SG
Sbjct: 112 KEIVDVCLDRIRKLADNCTGLQGFLVFNAVGGGTGSG 148



 Score = 54.7 bits (130), Expect(2) = 1e-21
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -2

Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20
           +GSLLLERLSV+YGKKSKLGF++YPSPQ
Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQ 176


>gb|AFC88824.1| putative tubulin alpha-3 chain [Miscanthus sinensis]
          Length = 450

 Score = 72.0 bits (175), Expect(2) = 1e-21
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -3

Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103
           +EIVD+CLDR+RKLADNCT LQGFLVFNAVGGGT SG
Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSG 148



 Score = 55.8 bits (133), Expect(2) = 1e-21
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -2

Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20
           +GSLLLERLSVEYGKKSKLGF++YPSPQ
Sbjct: 149 LGSLLLERLSVEYGKKSKLGFTVYPSPQ 176


Top