BLASTX nr result
ID: Cnidium21_contig00037027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00037027 (416 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004141134.1| PREDICTED: tubulin alpha-3 chain-like [Cucum... 74 3e-22 ref|XP_004170946.1| PREDICTED: LOW QUALITY PROTEIN: tubulin alph... 74 3e-22 gb|AGG37290.1| alpha-tubulin 8 [Salix arbutifolia] 74 7e-22 ref|XP_003608582.1| Tubulin alpha-5 chain [Medicago truncatula] ... 73 1e-21 gb|AFC88824.1| putative tubulin alpha-3 chain [Miscanthus sinensis] 72 1e-21 >ref|XP_004141134.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus] Length = 449 Score = 73.6 bits (179), Expect(2) = 3e-22 Identities = 34/37 (91%), Positives = 35/37 (94%) Frame = -3 Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103 REIVD+CLDRVRKLADNCT LQGFLVFNAVGGGT SG Sbjct: 112 REIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSG 148 Score = 56.2 bits (134), Expect(2) = 3e-22 Identities = 26/28 (92%), Positives = 28/28 (100%) Frame = -2 Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20 +GSLLLERLSV+YGKKSKLGFSIYPSPQ Sbjct: 149 LGSLLLERLSVDYGKKSKLGFSIYPSPQ 176 >ref|XP_004170946.1| PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3 chain-like [Cucumis sativus] Length = 447 Score = 73.6 bits (179), Expect(2) = 3e-22 Identities = 34/37 (91%), Positives = 35/37 (94%) Frame = -3 Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103 REIVD+CLDRVRKLADNCT LQGFLVFNAVGGGT SG Sbjct: 112 REIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSG 148 Score = 56.2 bits (134), Expect(2) = 3e-22 Identities = 26/28 (92%), Positives = 28/28 (100%) Frame = -2 Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20 +GSLLLERLSV+YGKKSKLGFSIYPSPQ Sbjct: 149 LGSLLLERLSVDYGKKSKLGFSIYPSPQ 176 >gb|AGG37290.1| alpha-tubulin 8 [Salix arbutifolia] Length = 449 Score = 73.6 bits (179), Expect(2) = 7e-22 Identities = 34/37 (91%), Positives = 35/37 (94%) Frame = -3 Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103 REIVD+CLDRVRKLADNCT LQGFLVFNAVGGGT SG Sbjct: 112 REIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSG 148 Score = 55.1 bits (131), Expect(2) = 7e-22 Identities = 25/28 (89%), Positives = 28/28 (100%) Frame = -2 Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20 +GSLLLERLSV+YGKKSKLGF+IYPSPQ Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTIYPSPQ 176 >ref|XP_003608582.1| Tubulin alpha-5 chain [Medicago truncatula] gi|355509637|gb|AES90779.1| Tubulin alpha-5 chain [Medicago truncatula] Length = 451 Score = 73.2 bits (178), Expect(2) = 1e-21 Identities = 33/37 (89%), Positives = 35/37 (94%) Frame = -3 Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103 +EIVDVCLDR+RKLADNCT LQGFLVFNAVGGGT SG Sbjct: 112 KEIVDVCLDRIRKLADNCTGLQGFLVFNAVGGGTGSG 148 Score = 54.7 bits (130), Expect(2) = 1e-21 Identities = 24/28 (85%), Positives = 28/28 (100%) Frame = -2 Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20 +GSLLLERLSV+YGKKSKLGF++YPSPQ Sbjct: 149 LGSLLLERLSVDYGKKSKLGFTVYPSPQ 176 >gb|AFC88824.1| putative tubulin alpha-3 chain [Miscanthus sinensis] Length = 450 Score = 72.0 bits (175), Expect(2) = 1e-21 Identities = 32/37 (86%), Positives = 35/37 (94%) Frame = -3 Query: 213 REIVDVCLDRVRKLADNCTSLQGFLVFNAVGGGTSSG 103 +EIVD+CLDR+RKLADNCT LQGFLVFNAVGGGT SG Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSG 148 Score = 55.8 bits (133), Expect(2) = 1e-21 Identities = 25/28 (89%), Positives = 28/28 (100%) Frame = -2 Query: 103 IGSLLLERLSVEYGKKSKLGFSIYPSPQ 20 +GSLLLERLSVEYGKKSKLGF++YPSPQ Sbjct: 149 LGSLLLERLSVEYGKKSKLGFTVYPSPQ 176