BLASTX nr result

ID: Cnidium21_contig00036990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036990
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51221.1|AC051630_18 unknown protein; 73879-71181 [Arabidop...   140   9e-32
ref|NP_174614.2| RING-H2 finger protein ATL58 [Arabidopsis thali...   140   9e-32
ref|XP_002521749.1| protein with unknown function [Ricinus commu...   134   8e-30
ref|XP_002893771.1| hypothetical protein ARALYDRAFT_336421 [Arab...   129   2e-28
ref|XP_002319324.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28

>gb|AAG51221.1|AC051630_18 unknown protein; 73879-71181 [Arabidopsis thaliana]
          Length = 508

 Score =  140 bits (354), Expect = 9e-32
 Identities = 78/158 (49%), Positives = 92/158 (58%), Gaps = 6/158 (3%)
 Frame = +3

Query: 3   NISTCELGLKKEVREVLPIIVFKESFSVKDTQCSVCLGDYQAEDKLQQIPVCGHTFHMDC 182
           ++ST ELGL KE+RE+LPI+VFKESF+V D+QCSVCLGDYQ  DKLQQIPVC HTFHMDC
Sbjct: 68  SLSTIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDC 127

Query: 183 IDIWLATHTXXXXXXXXXXXXXXXDQPTD------NQDNETDLSPESPDVENHDEGSPQS 344
           ID+WL +HT                   D      + D E    PES  V NH   S Q 
Sbjct: 128 IDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPV-NHRVVSTQP 186

Query: 345 SSQPIGDPRLEANETDPSPESADVENHGEVSPQCSSQP 458
            S+P+    + +      PES  V NH  VS Q  SQP
Sbjct: 187 ESEPVNHSGVSS-----QPESQPVVNHRGVSSQPESQP 219


>ref|NP_174614.2| RING-H2 finger protein ATL58 [Arabidopsis thaliana]
           gi|68565103|sp|Q570X5.1|ATL58_ARATH RecName:
           Full=RING-H2 finger protein ATL58
           gi|62318524|dbj|BAD94869.1| hypothetical protein
           [Arabidopsis thaliana] gi|332193478|gb|AEE31599.1|
           RING-H2 finger protein ATL58 [Arabidopsis thaliana]
          Length = 261

 Score =  140 bits (354), Expect = 9e-32
 Identities = 78/158 (49%), Positives = 92/158 (58%), Gaps = 6/158 (3%)
 Frame = +3

Query: 3   NISTCELGLKKEVREVLPIIVFKESFSVKDTQCSVCLGDYQAEDKLQQIPVCGHTFHMDC 182
           ++ST ELGL KE+RE+LPI+VFKESF+V D+QCSVCLGDYQ  DKLQQIPVC HTFHMDC
Sbjct: 68  SLSTIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDC 127

Query: 183 IDIWLATHTXXXXXXXXXXXXXXXDQPTD------NQDNETDLSPESPDVENHDEGSPQS 344
           ID+WL +HT                   D      + D E    PES  V NH   S Q 
Sbjct: 128 IDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPV-NHRVVSTQP 186

Query: 345 SSQPIGDPRLEANETDPSPESADVENHGEVSPQCSSQP 458
            S+P+    + +      PES  V NH  VS Q  SQP
Sbjct: 187 ESEPVNHSGVSS-----QPESQPVVNHRGVSSQPESQP 219


>ref|XP_002521749.1| protein with unknown function [Ricinus communis]
           gi|223538962|gb|EEF40559.1| protein with unknown
           function [Ricinus communis]
          Length = 337

 Score =  134 bits (337), Expect = 8e-30
 Identities = 81/175 (46%), Positives = 99/175 (56%), Gaps = 10/175 (5%)
 Frame = +3

Query: 3   NISTCELGLKKEVREVLPIIVFKESFSVKDTQCSVCLGDYQAEDKLQQIPVCGHTFHMDC 182
           NI   ELGLKKEVRE+LPIIV+KESFSVKDTQC VCLGDYQAED+LQQIP CGHTFHM C
Sbjct: 74  NIFRAELGLKKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQIPACGHTFHMVC 133

Query: 183 IDIWLATHTXXXXXXXXXXXXXXXDQPTDNQDNETDLSPESPDVENHDEGSPQSSSQP-- 356
           ID WLA HT                 PT++ +N+ +   ES    +  E S QS S P  
Sbjct: 134 IDHWLANHTTCPLCRLSLVAPAKV--PTESPNNQVEAGQESFVAVSGGETSAQSGSGPGS 191

Query: 357 --------IGDPRLEANETDPSPESADVENHGEVSPQCSSQPSEDPQLKEQIFNI 497
                   + +PR E + T  S  SA+ E     S     +  ++ +  E+  NI
Sbjct: 192 CGESNSRGLSEPRNEDSGTAHS--SAEEEERRSQSADQGKEVRDEKKESEERENI 244


>ref|XP_002893771.1| hypothetical protein ARALYDRAFT_336421 [Arabidopsis lyrata subsp.
           lyrata] gi|297339613|gb|EFH70030.1| hypothetical protein
           ARALYDRAFT_336421 [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  129 bits (325), Expect = 2e-28
 Identities = 76/154 (49%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   NISTCELGLKKEVREVLPIIVFKESFSVKDTQCSVCLGDYQAEDKLQQIPVCGHTFHMDC 182
           ++ST ELGL KE+RE+LPI+VF+ESF+V D+QCSVCLGDYQA DKLQQIPVC HTFHMDC
Sbjct: 56  SLSTIELGLSKELREMLPIVVFRESFTVMDSQCSVCLGDYQANDKLQQIPVCKHTFHMDC 115

Query: 183 IDIWLATHTXXXXXXXXXXXXXXXDQPTDNQDNETDLSPE--SPDVENHDEGSPQSSSQP 356
           ID+WL +HT                 P+ +  ++ D  P   SPD E          SQP
Sbjct: 116 IDLWLTSHTTCPLCRLALI-------PSRSHQSQEDPVPSLVSPDGE--------VLSQP 160

Query: 357 IGDPRLEANETDPSPESADVENHGEVSPQCSSQP 458
             +P +        PES  V NH  VS Q  SQP
Sbjct: 161 ESEP-VNHRGVSSQPESEPV-NHRGVSSQPESQP 192


>ref|XP_002319324.1| predicted protein [Populus trichocarpa] gi|222857700|gb|EEE95247.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  128 bits (322), Expect = 5e-28
 Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
 Frame = +3

Query: 21  LGLKKEVREVLPIIVFKESFSVKDTQCSVCLGDYQAEDKLQQIPVCGHTFHMDCIDIWLA 200
           +GLKKE+RE+LPIIV+KESFSV+DTQC VCLGDYQAEDKLQQIP CGHTFHMDCID WLA
Sbjct: 1   MGLKKELREMLPIIVYKESFSVRDTQCPVCLGDYQAEDKLQQIPACGHTFHMDCIDHWLA 60

Query: 201 THTXXXXXXXXXXXXXXXDQPTDNQDNETDLSPESPDVENHDEGSPQSSSQPIGDPRLEA 380
            H                  P++   N+ +   ES   EN +E S Q   +   + +   
Sbjct: 61  NH--ITCPLCRLSLLPSVKAPSEPPRNQVETVQESSAAENGEEASVQPRPESCEESQATP 118

Query: 381 NETDPSPESADVENHG--EVSPQCSSQPSE 464
                  ES  ++N    E   +C+ Q  E
Sbjct: 119 LSQSMDEESGTLQNSAGEEQRSECADQGRE 148


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